Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MAPK10-319ENST00000641459 2542 ntBASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 AL031676.1-201ENST00000412519 1586 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 AL590999.1-201ENST00000607675 3776 ntTSL 2 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 ZNF69-202ENST00000429654 2010 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 AC093909.4-201ENST00000514297 1991 ntTSL 5 BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CDK5RAP1Q96SZ6 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 SMYD3-218ENST00000630181 1458 ntTSL 2 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 PPCS-204ENST00000372562 966 ntTSL 2 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 MED15P9-201ENST00000424716 533 ntBASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 RPS21P1-201ENST00000434479 247 ntBASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 LINC00331-201ENST00000446391 376 ntTSL 5 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 AL353718.1-201ENST00000451028 517 ntBASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 AC018635.1-201ENST00000468292 1030 ntBASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 RN7SL36P-201ENST00000469345 276 ntBASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 RPL7P17-201ENST00000470927 724 ntBASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 FTH1P23-201ENST00000492727 550 ntBASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 AC024451.1-201ENST00000508013 779 ntBASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 AC113352.1-201ENST00000513196 666 ntBASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 RN7SKP2-201ENST00000517003 319 ntBASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 RN7SKP64-201ENST00000517206 328 ntBASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 CTHRC1-203ENST00000520337 1198 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 AC103681.2-201ENST00000527450 567 ntTSL 4 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 SNHG1-223ENST00000545440 754 ntTSL 2 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 OR11J5P-201ENST00000556889 934 ntBASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 AC087286.4-201ENST00000558757 746 ntTSL 3 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 AC027319.1-201ENST00000591657 511 ntTSL 3 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 MIR6726-201ENST00000613751 61 ntBASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 MIR6829-201ENST00000620375 67 ntBASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 AC005383.1-201ENST00000622689 534 ntBASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 AC005609.2-201ENST00000623320 592 ntBASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 CCDC162P-202ENST00000368966 6751 ntBASIC8.07□□□□□ -1.12
CDK5RAP1Q96SZ6 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 SUN3-202ENST00000395572 1348 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 OSBPL6-202ENST00000315022 2999 ntTSL 2 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 LINC02099-202ENST00000522158 2980 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 MAML3-201ENST00000398940 831 ntTSL 5 BASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 TERF1P4-201ENST00000399580 1115 ntBASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 DDX11L10-201ENST00000430178 571 ntBASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 RPSAP62-201ENST00000432596 833 ntBASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 AL139135.2-201ENST00000445040 433 ntBASIC8.06□□□□□ -1.12
CDK5RAP1Q96SZ6 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms