Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC034105.2-201ENST00000561866 238 ntBASIC9.82□□□□□ -0.84
LRCH3Q96II8 AC036222.1-201ENST00000579972 701 ntTSL 3 BASIC9.82□□□□□ -0.84
LRCH3Q96II8 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC9.82□□□□□ -0.84
LRCH3Q96II8 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC9.82□□□□□ -0.84
LRCH3Q96II8 ZSCAN30-210ENST00000601405 510 ntTSL 5 BASIC9.82□□□□□ -0.84
LRCH3Q96II8 AC026150.3-201ENST00000602595 499 ntBASIC9.82□□□□□ -0.84
LRCH3Q96II8 AL583832.1-201ENST00000603227 784 ntBASIC9.82□□□□□ -0.84
LRCH3Q96II8 AL645933.2-201ENST00000606743 1207 ntBASIC9.82□□□□□ -0.84
LRCH3Q96II8 AL080285.2-201ENST00000612765 458 ntBASIC9.82□□□□□ -0.84
LRCH3Q96II8 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC9.82□□□□□ -0.84
LRCH3Q96II8 Metazoa_SRP.126-201ENST00000618354 266 ntBASIC9.82□□□□□ -0.84
LRCH3Q96II8 AC006338.1-201ENST00000618453 749 ntBASIC9.82□□□□□ -0.84
LRCH3Q96II8 AC091059.2-201ENST00000623355 614 ntBASIC9.82□□□□□ -0.84
LRCH3Q96II8 AP005264.7-201ENST00000625003 745 ntBASIC9.82□□□□□ -0.84
LRCH3Q96II8 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC9.82□□□□□ -0.84
LRCH3Q96II8 CASC19-274ENST00000642018 970 ntBASIC9.82□□□□□ -0.84
LRCH3Q96II8 CWC15-201ENST00000279839 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LRCH3Q96II8 AL445309.1-201ENST00000607565 1989 ntBASIC9.82□□□□□ -0.84
LRCH3Q96II8 SERAC1-205ENST00000607000 2284 ntTSL 2 BASIC9.82□□□□□ -0.84
LRCH3Q96II8 FCRLA-210ENST00000367959 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
LRCH3Q96II8 ZNF571-AS1-201ENST00000585578 2777 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LRCH3Q96II8 CHCHD5-202ENST00000409719 3272 ntTSL 2 BASIC9.82□□□□□ -0.84
LRCH3Q96II8 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LRCH3Q96II8 SLTM-202ENST00000380516 4147 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
LRCH3Q96II8 AK3-204ENST00000611749 4029 ntTSL 4 BASIC9.82□□□□□ -0.84
LRCH3Q96II8 OXNAD1-201ENST00000285083 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
LRCH3Q96II8 ZNF512-204ENST00000416005 3515 ntTSL 2 BASIC9.82□□□□□ -0.84
LRCH3Q96II8 TRPV3-205ENST00000572519 2937 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LRCH3Q96II8 LCP2-210ENST00000628092 2421 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
LRCH3Q96II8 ZNF710-AS1-202ENST00000620791 2133 ntBASIC9.82□□□□□ -0.84
LRCH3Q96II8 TPTE-201ENST00000427445 2036 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
LRCH3Q96II8 LINC02112-201ENST00000511616 1847 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LRCH3Q96II8 PACRG-203ENST00000366889 1503 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LRCH3Q96II8 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC9.82□□□□□ -0.84
LRCH3Q96II8 ABCC11-201ENST00000353782 4463 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LRCH3Q96II8 EHHADH-AS1-201ENST00000417720 1416 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LRCH3Q96II8 AC008432.1-201ENST00000615912 1320 ntBASIC9.82□□□□□ -0.84
LRCH3Q96II8 ABCB4-206ENST00000453593 3699 ntTSL 5 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 TSC22D2-201ENST00000361875 11154 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
LRCH3Q96II8 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 ZNF720-201ENST00000316491 2769 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
LRCH3Q96II8 STAG1-210ENST00000629124 4322 ntTSL 5 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 DNAJB7-201ENST00000307221 2578 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 TBC1D14-206ENST00000446947 4021 ntTSL 5 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 WISP1-202ENST00000250160 3844 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LRCH3Q96II8 IGSF3-201ENST00000318837 3842 ntAPPRIS P4 TSL 2 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 AL807761.4-201ENST00000439901 2277 ntTSL 2 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 ZMYM3-205ENST00000373984 5253 ntTSL 5 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 RBBP6-201ENST00000319715 6229 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LRCH3Q96II8 TAF9B-201ENST00000341864 2713 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LRCH3Q96II8 Z83847.1-201ENST00000569912 1463 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 NTPCR-202ENST00000366628 6311 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LRCH3Q96II8 ZNF157-201ENST00000377073 2318 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LRCH3Q96II8 RRP12-201ENST00000315563 4038 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LRCH3Q96II8 HNRNPH2-201ENST00000316594 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LRCH3Q96II8 AP3B2-209ENST00000542200 3921 ntTSL 2 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 CLASP1-201ENST00000263710 8092 ntTSL 5 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 RNU4-59P-201ENST00000364447 116 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 RN7SKP37-201ENST00000364494 296 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 DYNLT3-202ENST00000378581 920 ntTSL 2 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 MIR636-201ENST00000384825 99 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 AL139806.1-201ENST00000403057 1002 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 TRGV5P-201ENST00000419915 354 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 HNRNPA1P70-201ENST00000420836 1087 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 VN1R42P-201ENST00000424651 344 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 MIR205HG-204ENST00000431096 908 ntTSL 3 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 MTND1P32-201ENST00000433043 938 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 TAAR9-201ENST00000434551 1047 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 PDCD10-218ENST00000497056 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LRCH3Q96II8 LINC02115-201ENST00000503367 432 ntTSL 5 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 ARL2BPP6-201ENST00000512757 439 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LRCH3Q96II8 MTND6P20-201ENST00000522986 418 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 AC092818.1-201ENST00000523411 639 ntTSL 3 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 AP003392.2-201ENST00000527269 208 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 AC130364.2-201ENST00000528639 604 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 SETP17-201ENST00000534163 817 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 AC078955.1-201ENST00000547123 882 ntTSL 5 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 OR11H3P-201ENST00000554547 982 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 LINC02295-201ENST00000557072 374 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LRCH3Q96II8 AC024270.1-201ENST00000559181 404 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 AC021483.2-201ENST00000567415 758 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LRCH3Q96II8 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 AC097505.1-201ENST00000610199 565 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 LINC01796-201ENST00000611915 709 ntTSL 3 BASIC9.81□□□□□ -0.84
LRCH3Q96II8 AL138478.1-201ENST00000612252 832 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 AC009159.1-201ENST00000618386 642 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 AC048341.3-201ENST00000619323 491 ntBASIC9.81□□□□□ -0.84
LRCH3Q96II8 AC009093.6-201ENST00000622268 553 ntBASIC9.81□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms