Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC9.61□□□□□ -0.87
COL15A1P39059 RN7SL791P-201ENST00000467868 295 ntBASIC9.61□□□□□ -0.87
COL15A1P39059 RPL9P15-201ENST00000491096 532 ntBASIC9.61□□□□□ -0.87
COL15A1P39059 FTH1P23-201ENST00000492727 550 ntBASIC9.61□□□□□ -0.87
COL15A1P39059 RPL10P7-201ENST00000495649 625 ntBASIC9.61□□□□□ -0.87
COL15A1P39059 RN7SL612P-201ENST00000497704 295 ntBASIC9.61□□□□□ -0.87
COL15A1P39059 AC027315.1-201ENST00000511592 469 ntTSL 3 BASIC9.61□□□□□ -0.87
COL15A1P39059 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC9.61□□□□□ -0.87
COL15A1P39059 AL109628.1-201ENST00000556877 366 ntBASIC9.61□□□□□ -0.87
COL15A1P39059 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC9.61□□□□□ -0.87
COL15A1P39059 RN7SL835P-201ENST00000579920 262 ntBASIC9.61□□□□□ -0.87
COL15A1P39059 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC9.61□□□□□ -0.87
COL15A1P39059 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC9.61□□□□□ -0.87
COL15A1P39059 AC016405.2-201ENST00000607393 312 ntBASIC9.61□□□□□ -0.87
COL15A1P39059 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
COL15A1P39059 AL589743.4-201ENST00000610763 586 ntTSL 5 BASIC9.61□□□□□ -0.87
COL15A1P39059 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC9.61□□□□□ -0.87
COL15A1P39059 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC9.61□□□□□ -0.87
COL15A1P39059 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
COL15A1P39059 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC9.61□□□□□ -0.87
COL15A1P39059 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
COL15A1P39059 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC9.61□□□□□ -0.87
COL15A1P39059 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
COL15A1P39059 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC9.6□□□□□ -0.87
COL15A1P39059 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
COL15A1P39059 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
COL15A1P39059 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC9.6□□□□□ -0.87
COL15A1P39059 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
COL15A1P39059 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
COL15A1P39059 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC9.6□□□□□ -0.87
COL15A1P39059 AC005840.3-201ENST00000541888 1803 ntTSL 5 BASIC9.6□□□□□ -0.87
COL15A1P39059 AC098614.1-202ENST00000634895 1830 ntBASIC9.6□□□□□ -0.87
COL15A1P39059 TPD52-202ENST00000379097 2563 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
COL15A1P39059 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
COL15A1P39059 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
COL15A1P39059 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
COL15A1P39059 LINC00663-203ENST00000586885 2546 ntBASIC9.6□□□□□ -0.87
COL15A1P39059 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
COL15A1P39059 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
COL15A1P39059 RNA5SP429-201ENST00000363688 109 ntBASIC9.6□□□□□ -0.87
COL15A1P39059 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC9.6□□□□□ -0.87
COL15A1P39059 ANXA2P2-201ENST00000435128 1020 ntBASIC9.6□□□□□ -0.87
COL15A1P39059 AL604028.2-201ENST00000437848 788 ntBASIC9.6□□□□□ -0.87
COL15A1P39059 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC9.6□□□□□ -0.87
COL15A1P39059 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC9.6□□□□□ -0.87
COL15A1P39059 RN7SL149P-201ENST00000465197 281 ntBASIC9.6□□□□□ -0.87
COL15A1P39059 RN7SL259P-201ENST00000478499 253 ntBASIC9.6□□□□□ -0.87
COL15A1P39059 AP004833.1-201ENST00000507987 1238 ntBASIC9.6□□□□□ -0.87
COL15A1P39059 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
COL15A1P39059 MRPS5P3-201ENST00000515577 166 ntBASIC9.6□□□□□ -0.87
COL15A1P39059 AC103409.1-201ENST00000521199 564 ntTSL 5 BASIC9.6□□□□□ -0.87
COL15A1P39059 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC9.6□□□□□ -0.87
COL15A1P39059 AC104938.1-203ENST00000561834 546 ntTSL 3 BASIC9.6□□□□□ -0.87
COL15A1P39059 RN7SL426P-201ENST00000579106 295 ntBASIC9.6□□□□□ -0.87
COL15A1P39059 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC9.6□□□□□ -0.87
COL15A1P39059 AC113361.1-201ENST00000606683 543 ntBASIC9.6□□□□□ -0.87
COL15A1P39059 AC069499.2-201ENST00000610665 382 ntBASIC9.6□□□□□ -0.87
COL15A1P39059 AL138693.1-201ENST00000622219 129 ntBASIC9.6□□□□□ -0.87
COL15A1P39059 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC9.6□□□□□ -0.87
COL15A1P39059 TDGF1P3-202ENST00000602699 2710 ntBASIC9.6□□□□□ -0.87
COL15A1P39059 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
COL15A1P39059 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
COL15A1P39059 AL034397.3-202ENST00000621933 1815 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
COL15A1P39059 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
COL15A1P39059 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC9.59□□□□□ -0.87
COL15A1P39059 TREML2-201ENST00000483722 3302 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
COL15A1P39059 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
COL15A1P39059 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
COL15A1P39059 ZNF2-204ENST00000617923 3885 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
COL15A1P39059 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
COL15A1P39059 TBC1D30-204ENST00000542120 7433 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
COL15A1P39059 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
COL15A1P39059 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
COL15A1P39059 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
COL15A1P39059 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
COL15A1P39059 ETFBKMT-203ENST00000412352 1083 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
COL15A1P39059 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC9.59□□□□□ -0.87
COL15A1P39059 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC9.59□□□□□ -0.87
COL15A1P39059 AC092042.2-201ENST00000417304 331 ntBASIC9.59□□□□□ -0.87
COL15A1P39059 AC010145.1-201ENST00000422415 516 ntTSL 5 BASIC9.59□□□□□ -0.87
COL15A1P39059 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC9.59□□□□□ -0.87
COL15A1P39059 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC9.59□□□□□ -0.87
COL15A1P39059 AC140479.1-201ENST00000440423 337 ntBASIC9.59□□□□□ -0.87
COL15A1P39059 AC006042.1-201ENST00000449931 524 ntTSL 4 BASIC9.59□□□□□ -0.87
COL15A1P39059 RN7SKP105-201ENST00000517192 314 ntBASIC9.59□□□□□ -0.87
COL15A1P39059 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC9.59□□□□□ -0.87
COL15A1P39059 PHBP2-201ENST00000532859 806 ntBASIC9.59□□□□□ -0.87
COL15A1P39059 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
COL15A1P39059 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC9.59□□□□□ -0.87
COL15A1P39059 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC9.59□□□□□ -0.87
COL15A1P39059 AC080112.3-201ENST00000612552 880 ntBASIC9.59□□□□□ -0.87
COL15A1P39059 AC245407.2-201ENST00000614199 451 ntBASIC9.59□□□□□ -0.87
COL15A1P39059 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
COL15A1P39059 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC9.59□□□□□ -0.87
COL15A1P39059 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
COL15A1P39059 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
COL15A1P39059 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
COL15A1P39059 ZNF385B-202ENST00000409343 2750 ntTSL 2 BASIC9.59□□□□□ -0.87
COL15A1P39059 AL136298.2-201ENST00000556497 1570 ntBASIC9.59□□□□□ -0.87
COL15A1P39059 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms