Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 VNN3-201ENST00000275223 1260 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 TMEM126B-201ENST00000358867 989 ntAPPRIS P3 TSL 2 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 AL139327.1-201ENST00000382988 348 ntBASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 SNORA51.7-201ENST00000384171 134 ntBASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 AC093642.1-201ENST00000412193 565 ntTSL 3 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 AC092042.2-201ENST00000417304 331 ntBASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 PGAM1P3-201ENST00000420790 565 ntBASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 OR5M13P-201ENST00000433944 937 ntBASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 RPL7L1P11-201ENST00000446092 721 ntBASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 AL024493.1-201ENST00000449217 833 ntBASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 MRPS21P1-201ENST00000453850 223 ntBASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 RN7SL55P-201ENST00000464534 297 ntBASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 RPL34P22-201ENST00000468193 318 ntBASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 AC079944.1-201ENST00000485426 495 ntBASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 AC008629.3-201ENST00000505786 586 ntBASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 DKK2-202ENST00000510463 908 ntTSL 3 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 AC017007.5-201ENST00000511590 874 ntTSL 2 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 AC097460.2-201ENST00000511857 741 ntBASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 FLJ46284-202ENST00000521148 496 ntTSL 3 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 AP004833.3-201ENST00000531893 322 ntBASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 APEX1-214ENST00000557054 888 ntTSL 5 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 AL451054.1-201ENST00000621770 772 ntBASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 AC018558.4-201ENST00000622153 281 ntBASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 HBG1-202ENST00000632727 369 ntTSL 3 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 CYSLTR2-202ENST00000614739 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
HMG20BQ9P0W2 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 FAF2-201ENST00000261942 4515 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 AC130456.1-201ENST00000565085 1363 ntBASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 CASP8-208ENST00000392266 1283 ntTSL 2 BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 GAS8-AS1-201ENST00000408886 435 ntBASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 BCRP8-201ENST00000412037 255 ntBASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 AC093107.1-201ENST00000422772 609 ntBASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 AC140479.1-201ENST00000440423 337 ntBASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 ARMC8P1-201ENST00000443069 1289 ntBASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 CDC42P2-201ENST00000448566 569 ntBASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 C4orf19-203ENST00000508175 828 ntTSL 3 BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 RRM1-AS1-201ENST00000529323 346 ntTSL 5 BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 AC079313.2-201ENST00000550474 564 ntTSL 4 BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 LINC00520-206ENST00000560336 883 ntTSL 3 BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 AC091304.5-201ENST00000568969 158 ntBASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 AC040162.2-201ENST00000573092 157 ntBASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 AC008385.1-201ENST00000604421 355 ntBASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 AC103724.4-201ENST00000605981 292 ntBASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 MILR1-202ENST00000612535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 AC087893.2-201ENST00000623272 255 ntBASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 GOT2P1-201ENST00000440922 1309 ntBASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 AC009948.5-201ENST00000624360 4406 ntBASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC9.3□□□□□ -0.92
HMG20BQ9P0W2 LINC00641-202ENST00000555688 1763 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 CXCR4-201ENST00000241393 1682 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 AC022306.1-201ENST00000560489 1562 ntBASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
HMG20BQ9P0W2 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms