Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 AC016405.3-201ENST00000607710 860 ntBASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 AL356652.1-201ENST00000615962 565 ntBASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 AC231657.2-201ENST00000624556 255 ntBASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 AC008694.1-202ENST00000636953 945 ntBASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CCDC68Q9H2F9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 CYP21A1P-202ENST00000354927 1481 ntBASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 AC069236.1-201ENST00000604339 616 ntBASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCDC68Q9H2F9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 HCG11-201ENST00000411553 5696 ntBASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 AC007322.1-201ENST00000426983 750 ntBASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 CNN2P6-201ENST00000439038 900 ntBASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 RARRES2P4-201ENST00000514074 484 ntBASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 AC022517.1-201ENST00000592429 346 ntBASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 AL162377.1-201ENST00000618844 1793 ntBASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCDC68Q9H2F9 AC068338.2-201ENST00000563278 1430 ntBASIC20.1■□□□□ 0.81
CCDC68Q9H2F9 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC68Q9H2F9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC68Q9H2F9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC68Q9H2F9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC68Q9H2F9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC68Q9H2F9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC68Q9H2F9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC68Q9H2F9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC68Q9H2F9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC68Q9H2F9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.1■□□□□ 0.81
CCDC68Q9H2F9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC68Q9H2F9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC68Q9H2F9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC68Q9H2F9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.1■□□□□ 0.81
CCDC68Q9H2F9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.1■□□□□ 0.81
CCDC68Q9H2F9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC68Q9H2F9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CCDC68Q9H2F9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCDC68Q9H2F9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms