Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXC2Q99958 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXC2Q99958 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.99■□□□□ 0.31
FOXC2Q99958 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXC2Q99958 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.99■□□□□ 0.31
FOXC2Q99958 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.99■□□□□ 0.31
FOXC2Q99958 KSR1P1-201ENST00000446298 240 ntBASIC16.99■□□□□ 0.31
FOXC2Q99958 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXC2Q99958 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.99■□□□□ 0.31
FOXC2Q99958 AC010203.1-204ENST00000548782 407 ntBASIC16.99■□□□□ 0.31
FOXC2Q99958 KRT126P-201ENST00000549467 1181 ntBASIC16.99■□□□□ 0.31
FOXC2Q99958 AC006011.2-201ENST00000621313 1158 ntBASIC16.99■□□□□ 0.31
FOXC2Q99958 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.99■□□□□ 0.31
FOXC2Q99958 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.99■□□□□ 0.31
FOXC2Q99958 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
FOXC2Q99958 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXC2Q99958 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
FOXC2Q99958 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXC2Q99958 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXC2Q99958 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXC2Q99958 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXC2Q99958 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
FOXC2Q99958 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXC2Q99958 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXC2Q99958 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXC2Q99958 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXC2Q99958 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXC2Q99958 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXC2Q99958 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXC2Q99958 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXC2Q99958 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXC2Q99958 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXC2Q99958 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXC2Q99958 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXC2Q99958 AC023632.3-201ENST00000521633 145 ntBASIC16.98■□□□□ 0.31
FOXC2Q99958 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.98■□□□□ 0.31
FOXC2Q99958 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXC2Q99958 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXC2Q99958 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
FOXC2Q99958 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXC2Q99958 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
FOXC2Q99958 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.98■□□□□ 0.31
FOXC2Q99958 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.98■□□□□ 0.31
FOXC2Q99958 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXC2Q99958 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
FOXC2Q99958 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXC2Q99958 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXC2Q99958 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
FOXC2Q99958 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXC2Q99958 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
FOXC2Q99958 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXC2Q99958 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXC2Q99958 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXC2Q99958 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXC2Q99958 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
FOXC2Q99958 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.97■□□□□ 0.31
FOXC2Q99958 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXC2Q99958 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FOXC2Q99958 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXC2Q99958 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXC2Q99958 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
FOXC2Q99958 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
FOXC2Q99958 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
FOXC2Q99958 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.97■□□□□ 0.31
FOXC2Q99958 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
FOXC2Q99958 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
FOXC2Q99958 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
FOXC2Q99958 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC16.97■□□□□ 0.31
FOXC2Q99958 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXC2Q99958 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXC2Q99958 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXC2Q99958 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
FOXC2Q99958 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.96■□□□□ 0.31
FOXC2Q99958 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXC2Q99958 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.96■□□□□ 0.31
FOXC2Q99958 C2orf69P3-201ENST00000565542 1120 ntBASIC16.96■□□□□ 0.31
FOXC2Q99958 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.96■□□□□ 0.31
FOXC2Q99958 CR392000.1-201ENST00000624770 1228 ntBASIC16.96■□□□□ 0.31
FOXC2Q99958 AL358472.4-201ENST00000633140 710 ntBASIC16.96■□□□□ 0.31
FOXC2Q99958 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
FOXC2Q99958 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.96■□□□□ 0.31
FOXC2Q99958 AC027702.1-201ENST00000563810 1770 ntBASIC16.96■□□□□ 0.31
FOXC2Q99958 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.96■□□□□ 0.31
FOXC2Q99958 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
FOXC2Q99958 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
FOXC2Q99958 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
FOXC2Q99958 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.95■□□□□ 0.3
FOXC2Q99958 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXC2Q99958 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.95■□□□□ 0.3
FOXC2Q99958 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXC2Q99958 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXC2Q99958 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXC2Q99958 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
FOXC2Q99958 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXC2Q99958 NIFKP9-201ENST00000419265 221 ntBASIC16.95■□□□□ 0.3
FOXC2Q99958 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.95■□□□□ 0.3
FOXC2Q99958 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.95■□□□□ 0.3
FOXC2Q99958 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
FOXC2Q99958 KRT18P56-201ENST00000507275 550 ntBASIC16.95■□□□□ 0.3
FOXC2Q99958 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms