Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE1Q99829 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE1Q99829 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE1Q99829 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.11■□□□□ 0.81
CPNE1Q99829 AL162412.1-201ENST00000567129 965 ntBASIC20.11■□□□□ 0.81
CPNE1Q99829 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.11■□□□□ 0.81
CPNE1Q99829 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE1Q99829 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE1Q99829 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.11■□□□□ 0.81
CPNE1Q99829 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CPNE1Q99829 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE1Q99829 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE1Q99829 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE1Q99829 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CPNE1Q99829 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE1Q99829 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.1■□□□□ 0.81
CPNE1Q99829 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.1■□□□□ 0.81
CPNE1Q99829 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE1Q99829 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CPNE1Q99829 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
CPNE1Q99829 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CPNE1Q99829 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE1Q99829 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE1Q99829 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE1Q99829 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE1Q99829 AL158211.5-201ENST00000623583 2518 ntBASIC20.09■□□□□ 0.81
CPNE1Q99829 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE1Q99829 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE1Q99829 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE1Q99829 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE1Q99829 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CPNE1Q99829 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.09■□□□□ 0.81
CPNE1Q99829 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.09■□□□□ 0.81
CPNE1Q99829 NTF6G-201ENST00000591094 616 ntBASIC20.09■□□□□ 0.81
CPNE1Q99829 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CPNE1Q99829 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE1Q99829 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.09■□□□□ 0.81
CPNE1Q99829 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE1Q99829 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CPNE1Q99829 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CPNE1Q99829 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE1Q99829 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE1Q99829 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CPNE1Q99829 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.08■□□□□ 0.81
CPNE1Q99829 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.08■□□□□ 0.81
CPNE1Q99829 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE1Q99829 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE1Q99829 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.08■□□□□ 0.81
CPNE1Q99829 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.08■□□□□ 0.81
CPNE1Q99829 AC007322.4-201ENST00000509611 723 ntBASIC20.08■□□□□ 0.81
CPNE1Q99829 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CPNE1Q99829 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE1Q99829 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.08■□□□□ 0.81
CPNE1Q99829 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.08■□□□□ 0.81
CPNE1Q99829 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CPNE1Q99829 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CPNE1Q99829 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPNE1Q99829 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPNE1Q99829 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPNE1Q99829 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CPNE1Q99829 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.08■□□□□ 0.8
CPNE1Q99829 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CPNE1Q99829 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CPNE1Q99829 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE1Q99829 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE1Q99829 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CPNE1Q99829 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE1Q99829 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE1Q99829 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.07■□□□□ 0.8
CPNE1Q99829 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.07■□□□□ 0.8
CPNE1Q99829 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.07■□□□□ 0.8
CPNE1Q99829 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.07■□□□□ 0.8
CPNE1Q99829 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CPNE1Q99829 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.07■□□□□ 0.8
CPNE1Q99829 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE1Q99829 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.07■□□□□ 0.8
CPNE1Q99829 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE1Q99829 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
CPNE1Q99829 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE1Q99829 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE1Q99829 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE1Q99829 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.07■□□□□ 0.8
CPNE1Q99829 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE1Q99829 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE1Q99829 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CPNE1Q99829 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE1Q99829 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE1Q99829 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.06■□□□□ 0.8
CPNE1Q99829 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CPNE1Q99829 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CPNE1Q99829 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE1Q99829 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.06■□□□□ 0.8
CPNE1Q99829 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE1Q99829 KRT18P11-201ENST00000435214 1283 ntBASIC20.06■□□□□ 0.8
CPNE1Q99829 AC034268.1-201ENST00000441047 882 ntBASIC20.06■□□□□ 0.8
CPNE1Q99829 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.06■□□□□ 0.8
CPNE1Q99829 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.06■□□□□ 0.8
CPNE1Q99829 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CPNE1Q99829 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.06■□□□□ 0.8
CPNE1Q99829 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms