Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.17■□□□□ 0.5
SNRNP40Q96DI7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNRNP40Q96DI7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.17■□□□□ 0.5
SNRNP40Q96DI7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 AL031963.3-201ENST00000606441 850 ntBASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 LINC01568-207ENST00000641790 1380 ntBASIC18.16■□□□□ 0.5
SNRNP40Q96DI7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNRNP40Q96DI7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SNRNP40Q96DI7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNRNP40Q96DI7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNRNP40Q96DI7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.14■□□□□ 0.49
SNRNP40Q96DI7 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.14■□□□□ 0.49
SNRNP40Q96DI7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.14■□□□□ 0.49
SNRNP40Q96DI7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.14■□□□□ 0.49
SNRNP40Q96DI7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.14■□□□□ 0.49
SNRNP40Q96DI7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.14■□□□□ 0.49
SNRNP40Q96DI7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SNRNP40Q96DI7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.14■□□□□ 0.49
SNRNP40Q96DI7 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.14■□□□□ 0.49
SNRNP40Q96DI7 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNRNP40Q96DI7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNRNP40Q96DI7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNRNP40Q96DI7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.14■□□□□ 0.49
SNRNP40Q96DI7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNRNP40Q96DI7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SNRNP40Q96DI7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SNRNP40Q96DI7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNRNP40Q96DI7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNRNP40Q96DI7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNRNP40Q96DI7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNRNP40Q96DI7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.13■□□□□ 0.49
SNRNP40Q96DI7 AC113347.1-201ENST00000413321 391 ntBASIC18.13■□□□□ 0.49
SNRNP40Q96DI7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.13■□□□□ 0.49
SNRNP40Q96DI7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
SNRNP40Q96DI7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNRNP40Q96DI7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SNRNP40Q96DI7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SNRNP40Q96DI7 KRT8P36-201ENST00000489121 1440 ntBASIC18.13■□□□□ 0.49
SNRNP40Q96DI7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNRNP40Q96DI7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SNRNP40Q96DI7 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SNRNP40Q96DI7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.12■□□□□ 0.49
SNRNP40Q96DI7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNRNP40Q96DI7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNRNP40Q96DI7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SNRNP40Q96DI7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.12■□□□□ 0.49
SNRNP40Q96DI7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
SNRNP40Q96DI7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNRNP40Q96DI7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SNRNP40Q96DI7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNRNP40Q96DI7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.12■□□□□ 0.49
SNRNP40Q96DI7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNRNP40Q96DI7 KRT18P57-201ENST00000443599 1254 ntBASIC18.12■□□□□ 0.49
SNRNP40Q96DI7 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.12■□□□□ 0.49
SNRNP40Q96DI7 NAPSB-206ENST00000562112 1266 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms