Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS33AQ96AX1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS33AQ96AX1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS33AQ96AX1 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VPS33AQ96AX1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS33AQ96AX1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VPS33AQ96AX1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
VPS33AQ96AX1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VPS33AQ96AX1 AC027612.3-201ENST00000413684 1047 ntBASIC19.29■□□□□ 0.68
VPS33AQ96AX1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.29■□□□□ 0.68
VPS33AQ96AX1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
VPS33AQ96AX1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.29■□□□□ 0.68
VPS33AQ96AX1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.29■□□□□ 0.68
VPS33AQ96AX1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VPS33AQ96AX1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.29■□□□□ 0.68
VPS33AQ96AX1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
VPS33AQ96AX1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
VPS33AQ96AX1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS33AQ96AX1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS33AQ96AX1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VPS33AQ96AX1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 AC091799.1-201ENST00000422823 811 ntBASIC19.28■□□□□ 0.68
VPS33AQ96AX1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
VPS33AQ96AX1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.27■□□□□ 0.68
VPS33AQ96AX1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS33AQ96AX1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS33AQ96AX1 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.27■□□□□ 0.68
VPS33AQ96AX1 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS33AQ96AX1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.27■□□□□ 0.68
VPS33AQ96AX1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS33AQ96AX1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
VPS33AQ96AX1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS33AQ96AX1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
VPS33AQ96AX1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
VPS33AQ96AX1 AC105265.2-201ENST00000467189 838 ntBASIC19.27■□□□□ 0.68
VPS33AQ96AX1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.27■□□□□ 0.68
VPS33AQ96AX1 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.27■□□□□ 0.68
VPS33AQ96AX1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VPS33AQ96AX1 LINC02228-203ENST00000641970 1355 ntBASIC19.27■□□□□ 0.68
VPS33AQ96AX1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
VPS33AQ96AX1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
VPS33AQ96AX1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.26■□□□□ 0.67
VPS33AQ96AX1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
VPS33AQ96AX1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS33AQ96AX1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS33AQ96AX1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS33AQ96AX1 AL020996.1-203ENST00000536896 2307 ntBASIC19.25■□□□□ 0.67
VPS33AQ96AX1 AC098818.2-201ENST00000564925 2320 ntBASIC19.25■□□□□ 0.67
VPS33AQ96AX1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
VPS33AQ96AX1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS33AQ96AX1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VPS33AQ96AX1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS33AQ96AX1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
VPS33AQ96AX1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.25■□□□□ 0.67
VPS33AQ96AX1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.25■□□□□ 0.67
VPS33AQ96AX1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.25■□□□□ 0.67
VPS33AQ96AX1 CCDC92B-201ENST00000575506 885 ntBASIC19.25■□□□□ 0.67
VPS33AQ96AX1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VPS33AQ96AX1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms