Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.27■□□□□ 0.52
HPS1Q92902 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
HPS1Q92902 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
HPS1Q92902 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HPS1Q92902 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.27■□□□□ 0.52
HPS1Q92902 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HPS1Q92902 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.27■□□□□ 0.52
HPS1Q92902 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HPS1Q92902 AL034346.1-201ENST00000568244 1277 ntBASIC18.27■□□□□ 0.52
HPS1Q92902 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
HPS1Q92902 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
HPS1Q92902 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HPS1Q92902 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
HPS1Q92902 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
HPS1Q92902 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HPS1Q92902 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HPS1Q92902 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.26■□□□□ 0.51
HPS1Q92902 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.26■□□□□ 0.51
HPS1Q92902 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
HPS1Q92902 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.26■□□□□ 0.51
HPS1Q92902 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HPS1Q92902 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.26■□□□□ 0.51
HPS1Q92902 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.26■□□□□ 0.51
HPS1Q92902 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
HPS1Q92902 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HPS1Q92902 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HPS1Q92902 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.26■□□□□ 0.51
HPS1Q92902 AC020763.4-201ENST00000623414 4170 ntBASIC18.26■□□□□ 0.51
HPS1Q92902 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.26■□□□□ 0.51
HPS1Q92902 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HPS1Q92902 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.25■□□□□ 0.51
HPS1Q92902 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS1Q92902 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS1Q92902 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS1Q92902 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HPS1Q92902 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HPS1Q92902 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HPS1Q92902 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.25■□□□□ 0.51
HPS1Q92902 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
HPS1Q92902 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HPS1Q92902 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
HPS1Q92902 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HPS1Q92902 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.25■□□□□ 0.51
HPS1Q92902 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.25■□□□□ 0.51
HPS1Q92902 AC004911.1-201ENST00000416316 871 ntBASIC18.25■□□□□ 0.51
HPS1Q92902 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.25■□□□□ 0.51
HPS1Q92902 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS1Q92902 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
HPS1Q92902 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS1Q92902 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HPS1Q92902 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS1Q92902 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.25■□□□□ 0.51
HPS1Q92902 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HPS1Q92902 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HPS1Q92902 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HPS1Q92902 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.25■□□□□ 0.51
HPS1Q92902 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
HPS1Q92902 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HPS1Q92902 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HPS1Q92902 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS1Q92902 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.24■□□□□ 0.51
HPS1Q92902 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS1Q92902 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS1Q92902 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS1Q92902 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS1Q92902 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.24■□□□□ 0.51
HPS1Q92902 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
HPS1Q92902 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.24■□□□□ 0.51
HPS1Q92902 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS1Q92902 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS1Q92902 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HPS1Q92902 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.24■□□□□ 0.51
HPS1Q92902 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.24■□□□□ 0.51
HPS1Q92902 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.24■□□□□ 0.51
HPS1Q92902 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.24■□□□□ 0.51
HPS1Q92902 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.24■□□□□ 0.51
HPS1Q92902 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.24■□□□□ 0.51
HPS1Q92902 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HPS1Q92902 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.24■□□□□ 0.51
HPS1Q92902 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS1Q92902 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS1Q92902 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS1Q92902 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
HPS1Q92902 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.24■□□□□ 0.51
HPS1Q92902 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS1Q92902 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HPS1Q92902 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPS1Q92902 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.23■□□□□ 0.51
HPS1Q92902 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPS1Q92902 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPS1Q92902 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HPS1Q92902 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPS1Q92902 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HPS1Q92902 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPS1Q92902 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HPS1Q92902 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HPS1Q92902 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
HPS1Q92902 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
HPS1Q92902 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
HPS1Q92902 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms