Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SH3RF3Q8TEJ3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
SH3RF3Q8TEJ3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.99■■□□□ 1.43
SH3RF3Q8TEJ3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.99■■□□□ 1.43
SH3RF3Q8TEJ3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SH3RF3Q8TEJ3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
SH3RF3Q8TEJ3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SH3RF3Q8TEJ3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23.99■■□□□ 1.43
SH3RF3Q8TEJ3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SH3RF3Q8TEJ3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.99■■□□□ 1.43
SH3RF3Q8TEJ3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
SH3RF3Q8TEJ3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SH3RF3Q8TEJ3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SH3RF3Q8TEJ3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
SH3RF3Q8TEJ3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SH3RF3Q8TEJ3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SH3RF3Q8TEJ3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SH3RF3Q8TEJ3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.98■■□□□ 1.43
SH3RF3Q8TEJ3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SH3RF3Q8TEJ3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC23.98■■□□□ 1.43
SH3RF3Q8TEJ3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SH3RF3Q8TEJ3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.98■■□□□ 1.43
SH3RF3Q8TEJ3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.98■■□□□ 1.43
SH3RF3Q8TEJ3 AL121829.2-201ENST00000620908 328 ntBASIC23.98■■□□□ 1.43
SH3RF3Q8TEJ3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
SH3RF3Q8TEJ3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SH3RF3Q8TEJ3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC23.98■■□□□ 1.43
SH3RF3Q8TEJ3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.98■■□□□ 1.43
SH3RF3Q8TEJ3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.98■■□□□ 1.43
SH3RF3Q8TEJ3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SH3RF3Q8TEJ3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.98■■□□□ 1.43
SH3RF3Q8TEJ3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SH3RF3Q8TEJ3 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
SH3RF3Q8TEJ3 RPS2P55-201ENST00000397318 883 ntBASIC23.97■■□□□ 1.43
SH3RF3Q8TEJ3 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.97■■□□□ 1.43
SH3RF3Q8TEJ3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SH3RF3Q8TEJ3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
SH3RF3Q8TEJ3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC23.97■■□□□ 1.43
SH3RF3Q8TEJ3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SH3RF3Q8TEJ3 AC107956.1-201ENST00000494359 873 ntBASIC23.97■■□□□ 1.43
SH3RF3Q8TEJ3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC23.97■■□□□ 1.43
SH3RF3Q8TEJ3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.97■■□□□ 1.43
SH3RF3Q8TEJ3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.97■■□□□ 1.43
SH3RF3Q8TEJ3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC23.97■■□□□ 1.43
SH3RF3Q8TEJ3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SH3RF3Q8TEJ3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.97■■□□□ 1.43
SH3RF3Q8TEJ3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC23.96■■□□□ 1.43
SH3RF3Q8TEJ3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.43
SH3RF3Q8TEJ3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SH3RF3Q8TEJ3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
SH3RF3Q8TEJ3 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
SH3RF3Q8TEJ3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.95■■□□□ 1.42
SH3RF3Q8TEJ3 PRKY-204ENST00000533551 1019 ntBASIC23.95■■□□□ 1.42
SH3RF3Q8TEJ3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SH3RF3Q8TEJ3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
SH3RF3Q8TEJ3 AC233702.5-201ENST00000584107 538 ntBASIC23.95■■□□□ 1.42
SH3RF3Q8TEJ3 AL031963.3-201ENST00000606441 850 ntBASIC23.95■■□□□ 1.42
SH3RF3Q8TEJ3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
SH3RF3Q8TEJ3 AC007375.3-201ENST00000600936 2314 ntBASIC23.95■■□□□ 1.42
SH3RF3Q8TEJ3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SH3RF3Q8TEJ3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
SH3RF3Q8TEJ3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SH3RF3Q8TEJ3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SH3RF3Q8TEJ3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SH3RF3Q8TEJ3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SH3RF3Q8TEJ3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC23.94■■□□□ 1.42
SH3RF3Q8TEJ3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
SH3RF3Q8TEJ3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SH3RF3Q8TEJ3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SH3RF3Q8TEJ3 HLA-G-202ENST00000376815 851 ntBASIC23.94■■□□□ 1.42
SH3RF3Q8TEJ3 HLA-G-203ENST00000376818 1127 ntBASIC23.94■■□□□ 1.42
SH3RF3Q8TEJ3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC23.94■■□□□ 1.42
SH3RF3Q8TEJ3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC23.94■■□□□ 1.42
SH3RF3Q8TEJ3 AC012618.2-201ENST00000428058 849 ntBASIC23.94■■□□□ 1.42
SH3RF3Q8TEJ3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
SH3RF3Q8TEJ3 DPP3P2-201ENST00000416030 1696 ntBASIC23.94■■□□□ 1.42
SH3RF3Q8TEJ3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SH3RF3Q8TEJ3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SH3RF3Q8TEJ3 KRT8P20-201ENST00000423953 1409 ntBASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms