Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 AC110285.6-201ENST00000617652 491 ntBASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 KRT16P2-201ENST00000414673 1423 ntBASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20■□□□□ 0.79
RAB3IL1Q8TBN0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
RAB3IL1Q8TBN0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IL1Q8TBN0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.99■□□□□ 0.79
RAB3IL1Q8TBN0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
RAB3IL1Q8TBN0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IL1Q8TBN0 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IL1Q8TBN0 AC116050.2-201ENST00000612102 1779 ntBASIC19.99■□□□□ 0.79
RAB3IL1Q8TBN0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IL1Q8TBN0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
RAB3IL1Q8TBN0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IL1Q8TBN0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IL1Q8TBN0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.99■□□□□ 0.79
RAB3IL1Q8TBN0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IL1Q8TBN0 AC096631.2-201ENST00000436136 790 ntBASIC19.99■□□□□ 0.79
RAB3IL1Q8TBN0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IL1Q8TBN0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.99■□□□□ 0.79
RAB3IL1Q8TBN0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IL1Q8TBN0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB3IL1Q8TBN0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IL1Q8TBN0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IL1Q8TBN0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 BCL2-203ENST00000589955 5011 ntBASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 AC005332.7-201ENST00000614046 2005 ntBASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 TSPY26P-201ENST00000476365 1326 ntBASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IL1Q8TBN0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 UNC93B3-201ENST00000308076 687 ntBASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 TNXA-203ENST00000507684 2038 ntBASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IL1Q8TBN0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 MIR572-201ENST00000384983 95 ntBASIC19.96■□□□□ 0.79
RAB3IL1Q8TBN0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms