Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC239809.2-201ENST00000415381 517 ntBASIC21.17■□□□□ 0.98
SHKBP1Q8TBC3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.17■□□□□ 0.98
SHKBP1Q8TBC3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.17■□□□□ 0.98
SHKBP1Q8TBC3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.17■□□□□ 0.98
SHKBP1Q8TBC3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHKBP1Q8TBC3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.17■□□□□ 0.98
SHKBP1Q8TBC3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SHKBP1Q8TBC3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.17■□□□□ 0.98
SHKBP1Q8TBC3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SHKBP1Q8TBC3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SHKBP1Q8TBC3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHKBP1Q8TBC3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHKBP1Q8TBC3 Z98882.1-201ENST00000622160 2253 ntBASIC21.16■□□□□ 0.98
SHKBP1Q8TBC3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
SHKBP1Q8TBC3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.16■□□□□ 0.98
SHKBP1Q8TBC3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC21.16■□□□□ 0.98
SHKBP1Q8TBC3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SHKBP1Q8TBC3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHKBP1Q8TBC3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SHKBP1Q8TBC3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.16■□□□□ 0.98
SHKBP1Q8TBC3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SHKBP1Q8TBC3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SHKBP1Q8TBC3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SHKBP1Q8TBC3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 AL157384.1-201ENST00000445995 2473 ntBASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 KRASP1-201ENST00000407852 552 ntBASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 AC027702.1-201ENST00000563810 1770 ntBASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.15■□□□□ 0.98
SHKBP1Q8TBC3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SHKBP1Q8TBC3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SHKBP1Q8TBC3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SHKBP1Q8TBC3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SHKBP1Q8TBC3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SHKBP1Q8TBC3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SHKBP1Q8TBC3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHKBP1Q8TBC3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHKBP1Q8TBC3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.14■□□□□ 0.97
SHKBP1Q8TBC3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHKBP1Q8TBC3 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SHKBP1Q8TBC3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHKBP1Q8TBC3 AC012618.2-201ENST00000428058 849 ntBASIC21.14■□□□□ 0.97
SHKBP1Q8TBC3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SHKBP1Q8TBC3 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.14■□□□□ 0.97
SHKBP1Q8TBC3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHKBP1Q8TBC3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SHKBP1Q8TBC3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.14■□□□□ 0.97
SHKBP1Q8TBC3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.14■□□□□ 0.97
SHKBP1Q8TBC3 AC233702.5-201ENST00000584107 538 ntBASIC21.14■□□□□ 0.97
SHKBP1Q8TBC3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SHKBP1Q8TBC3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SHKBP1Q8TBC3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SHKBP1Q8TBC3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SHKBP1Q8TBC3 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 RPS2P55-201ENST00000397318 883 ntBASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 AC107956.1-201ENST00000494359 873 ntBASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHKBP1Q8TBC3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHKBP1Q8TBC3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.12■□□□□ 0.97
SHKBP1Q8TBC3 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHKBP1Q8TBC3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.12■□□□□ 0.97
SHKBP1Q8TBC3 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHKBP1Q8TBC3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHKBP1Q8TBC3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SHKBP1Q8TBC3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
SHKBP1Q8TBC3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms