Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 TSPY20P-201ENST00000450910 630 ntBASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 AC008403.3-201ENST00000598924 454 ntBASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 AC006557.6-201ENST00000623071 864 ntBASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.4■□□□□ 0.7
LINC01555Q8NAE3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
LINC01555Q8NAE3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
LINC01555Q8NAE3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.39■□□□□ 0.69
LINC01555Q8NAE3 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.39■□□□□ 0.69
LINC01555Q8NAE3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01555Q8NAE3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01555Q8NAE3 AL031963.3-201ENST00000606441 850 ntBASIC19.39■□□□□ 0.69
LINC01555Q8NAE3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.39■□□□□ 0.69
LINC01555Q8NAE3 KRT8P17-201ENST00000453110 1448 ntBASIC19.39■□□□□ 0.69
LINC01555Q8NAE3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01555Q8NAE3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01555Q8NAE3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01555Q8NAE3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.39■□□□□ 0.69
LINC01555Q8NAE3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.39■□□□□ 0.69
LINC01555Q8NAE3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01555Q8NAE3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.39■□□□□ 0.69
LINC01555Q8NAE3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
LINC01555Q8NAE3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.39■□□□□ 0.69
LINC01555Q8NAE3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 KRT8P20-201ENST00000423953 1409 ntBASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 UNC93B4-201ENST00000505679 747 ntBASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01555Q8NAE3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.37■□□□□ 0.69
LINC01555Q8NAE3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.37■□□□□ 0.69
LINC01555Q8NAE3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01555Q8NAE3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01555Q8NAE3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
LINC01555Q8NAE3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LINC01555Q8NAE3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01555Q8NAE3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01555Q8NAE3 ESRRAP1-201ENST00000400596 1257 ntBASIC19.37■□□□□ 0.69
LINC01555Q8NAE3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
LINC01555Q8NAE3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.37■□□□□ 0.69
LINC01555Q8NAE3 AC026366.1-201ENST00000488803 879 ntBASIC19.37■□□□□ 0.69
LINC01555Q8NAE3 AP003097.1-201ENST00000530657 1135 ntBASIC19.37■□□□□ 0.69
LINC01555Q8NAE3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01555Q8NAE3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01555Q8NAE3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LINC01555Q8NAE3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01555Q8NAE3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01555Q8NAE3 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01555Q8NAE3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.36■□□□□ 0.69
LINC01555Q8NAE3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LINC01555Q8NAE3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
LINC01555Q8NAE3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01555Q8NAE3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01555Q8NAE3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01555Q8NAE3 ABHD17AP1-201ENST00000358206 933 ntBASIC19.36■□□□□ 0.69
LINC01555Q8NAE3 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.36■□□□□ 0.69
LINC01555Q8NAE3 AL390719.1-204ENST00000412397 1219 ntBASIC19.36■□□□□ 0.69
LINC01555Q8NAE3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.36■□□□□ 0.69
LINC01555Q8NAE3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.36■□□□□ 0.69
LINC01555Q8NAE3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.36■□□□□ 0.69
LINC01555Q8NAE3 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC01555Q8NAE3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.36■□□□□ 0.69
LINC01555Q8NAE3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms