Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPSF7Q8N684 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPSF7Q8N684 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPSF7Q8N684 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.63■□□□□ 0.73
CPSF7Q8N684 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.63■□□□□ 0.73
CPSF7Q8N684 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CPSF7Q8N684 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPSF7Q8N684 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.63■□□□□ 0.73
CPSF7Q8N684 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CPSF7Q8N684 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPSF7Q8N684 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CPSF7Q8N684 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
CPSF7Q8N684 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPSF7Q8N684 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPSF7Q8N684 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPSF7Q8N684 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.62■□□□□ 0.73
CPSF7Q8N684 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CPSF7Q8N684 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.62■□□□□ 0.73
CPSF7Q8N684 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.62■□□□□ 0.73
CPSF7Q8N684 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CPSF7Q8N684 TMEM179-206ENST00000616017 1645 ntBASIC19.62■□□□□ 0.73
CPSF7Q8N684 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CPSF7Q8N684 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPSF7Q8N684 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPSF7Q8N684 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPSF7Q8N684 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.61■□□□□ 0.73
CPSF7Q8N684 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPSF7Q8N684 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CPSF7Q8N684 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPSF7Q8N684 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CPSF7Q8N684 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
CPSF7Q8N684 POU5F1P4-201ENST00000413175 1085 ntBASIC19.61■□□□□ 0.73
CPSF7Q8N684 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.61■□□□□ 0.73
CPSF7Q8N684 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.61■□□□□ 0.73
CPSF7Q8N684 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.61■□□□□ 0.73
CPSF7Q8N684 BID-214ENST00000617586 542 ntTSL 5 BASIC19.61■□□□□ 0.73
CPSF7Q8N684 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.61■□□□□ 0.73
CPSF7Q8N684 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CPSF7Q8N684 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.61■□□□□ 0.73
CPSF7Q8N684 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPSF7Q8N684 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CPSF7Q8N684 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
CPSF7Q8N684 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.61■□□□□ 0.73
CPSF7Q8N684 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CPSF7Q8N684 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CPSF7Q8N684 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF7Q8N684 KRT87P-202ENST00000534226 1464 ntBASIC19.6■□□□□ 0.73
CPSF7Q8N684 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.6■□□□□ 0.73
CPSF7Q8N684 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF7Q8N684 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CPSF7Q8N684 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.6■□□□□ 0.73
CPSF7Q8N684 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.6■□□□□ 0.73
CPSF7Q8N684 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.6■□□□□ 0.73
CPSF7Q8N684 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF7Q8N684 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF7Q8N684 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF7Q8N684 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CPSF7Q8N684 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF7Q8N684 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF7Q8N684 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF7Q8N684 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.6■□□□□ 0.73
CPSF7Q8N684 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF7Q8N684 AC104187.1-201ENST00000607510 612 ntBASIC19.6■□□□□ 0.73
CPSF7Q8N684 AC073111.5-205ENST00000641717 521 ntBASIC19.6■□□□□ 0.73
CPSF7Q8N684 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CPSF7Q8N684 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF7Q8N684 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF7Q8N684 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF7Q8N684 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF7Q8N684 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CPSF7Q8N684 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF7Q8N684 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CPSF7Q8N684 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPSF7Q8N684 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPSF7Q8N684 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CPSF7Q8N684 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPSF7Q8N684 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CPSF7Q8N684 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CPSF7Q8N684 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPSF7Q8N684 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.59■□□□□ 0.73
CPSF7Q8N684 ID1-201ENST00000376105 1233 ntBASIC19.59■□□□□ 0.73
CPSF7Q8N684 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CPSF7Q8N684 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.59■□□□□ 0.73
CPSF7Q8N684 CDCA4P2-201ENST00000441182 718 ntBASIC19.59■□□□□ 0.73
CPSF7Q8N684 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CPSF7Q8N684 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.59■□□□□ 0.73
CPSF7Q8N684 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPSF7Q8N684 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPSF7Q8N684 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPSF7Q8N684 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.59■□□□□ 0.73
CPSF7Q8N684 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.59■□□□□ 0.73
CPSF7Q8N684 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPSF7Q8N684 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CPSF7Q8N684 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CPSF7Q8N684 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CPSF7Q8N684 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CPSF7Q8N684 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPSF7Q8N684 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CPSF7Q8N684 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CPSF7Q8N684 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms