Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 MIR4651-201ENST00000582622 73 ntBASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAM1L1Q8N609 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 AC006557.6-201ENST00000623071 864 ntBASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAM1L1Q8N609 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 AC026366.1-201ENST00000488803 879 ntBASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 AP003097.1-201ENST00000530657 1135 ntBASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAM1L1Q8N609 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAM1L1Q8N609 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAM1L1Q8N609 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TRAM1L1Q8N609 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAM1L1Q8N609 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAM1L1Q8N609 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TRAM1L1Q8N609 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.88■□□□□ 0.77
TRAM1L1Q8N609 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.88■□□□□ 0.77
TRAM1L1Q8N609 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.88■□□□□ 0.77
TRAM1L1Q8N609 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.88■□□□□ 0.77
TRAM1L1Q8N609 AC008403.3-201ENST00000598924 454 ntBASIC19.88■□□□□ 0.77
TRAM1L1Q8N609 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.88■□□□□ 0.77
TRAM1L1Q8N609 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAM1L1Q8N609 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAM1L1Q8N609 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAM1L1Q8N609 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAM1L1Q8N609 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.88■□□□□ 0.77
TRAM1L1Q8N609 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAM1L1Q8N609 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAM1L1Q8N609 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 ESRRAP1-201ENST00000400596 1257 ntBASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 AC008687.6-201ENST00000596318 630 ntBASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAM1L1Q8N609 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms