Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RFWD3Q6PCD5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
RFWD3Q6PCD5 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 AC092368.3-202ENST00000574180 1591 ntBASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 POU5F1P3-201ENST00000428824 1078 ntBASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 UNC93B5-201ENST00000530315 699 ntBASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 AC060766.5-201ENST00000590539 871 ntBASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
RFWD3Q6PCD5 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
RFWD3Q6PCD5 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RFWD3Q6PCD5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.94■□□□□ 0.94
RFWD3Q6PCD5 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
RFWD3Q6PCD5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.94■□□□□ 0.94
RFWD3Q6PCD5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFWD3Q6PCD5 ESRRAP1-201ENST00000400596 1257 ntBASIC20.94■□□□□ 0.94
RFWD3Q6PCD5 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.94■□□□□ 0.94
RFWD3Q6PCD5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFWD3Q6PCD5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.94■□□□□ 0.94
RFWD3Q6PCD5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RFWD3Q6PCD5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFWD3Q6PCD5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFWD3Q6PCD5 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RFWD3Q6PCD5 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.94■□□□□ 0.94
RFWD3Q6PCD5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.94■□□□□ 0.94
RFWD3Q6PCD5 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.94■□□□□ 0.94
RFWD3Q6PCD5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.94■□□□□ 0.94
RFWD3Q6PCD5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RFWD3Q6PCD5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 PNMA6B-201ENST00000538162 1200 ntBASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RFWD3Q6PCD5 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD3Q6PCD5 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RFWD3Q6PCD5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD3Q6PCD5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD3Q6PCD5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD3Q6PCD5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.92■□□□□ 0.94
RFWD3Q6PCD5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.92■□□□□ 0.94
RFWD3Q6PCD5 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.92■□□□□ 0.94
RFWD3Q6PCD5 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD3Q6PCD5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD3Q6PCD5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.92■□□□□ 0.94
RFWD3Q6PCD5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.92■□□□□ 0.94
RFWD3Q6PCD5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD3Q6PCD5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RFWD3Q6PCD5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFWD3Q6PCD5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFWD3Q6PCD5 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFWD3Q6PCD5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFWD3Q6PCD5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RFWD3Q6PCD5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFWD3Q6PCD5 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFWD3Q6PCD5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RFWD3Q6PCD5 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RFWD3Q6PCD5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
RFWD3Q6PCD5 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.91■□□□□ 0.94
RFWD3Q6PCD5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.91■□□□□ 0.94
RFWD3Q6PCD5 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.91■□□□□ 0.94
RFWD3Q6PCD5 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.91■□□□□ 0.94
RFWD3Q6PCD5 TMEM191A-211ENST00000637163 1067 ntBASIC20.91■□□□□ 0.94
RFWD3Q6PCD5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
RFWD3Q6PCD5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms