Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ALFQ53S48 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ALFQ53S48 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ALFQ53S48 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ALFQ53S48 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ALFQ53S48 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
ALFQ53S48 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ALFQ53S48 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.7■□□□□ 0.9
ALFQ53S48 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
ALFQ53S48 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ALFQ53S48 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.7■□□□□ 0.9
ALFQ53S48 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ALFQ53S48 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
ALFQ53S48 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ALFQ53S48 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ALFQ53S48 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.69■□□□□ 0.9
ALFQ53S48 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ALFQ53S48 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ALFQ53S48 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.69■□□□□ 0.9
ALFQ53S48 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
ALFQ53S48 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
ALFQ53S48 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.69■□□□□ 0.9
ALFQ53S48 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ALFQ53S48 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.69■□□□□ 0.9
ALFQ53S48 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ALFQ53S48 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.69■□□□□ 0.9
ALFQ53S48 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.69■□□□□ 0.9
ALFQ53S48 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ALFQ53S48 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.69■□□□□ 0.9
ALFQ53S48 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ALFQ53S48 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ALFQ53S48 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.68■□□□□ 0.9
ALFQ53S48 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALFQ53S48 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ALFQ53S48 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALFQ53S48 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALFQ53S48 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALFQ53S48 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALFQ53S48 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALFQ53S48 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ALFQ53S48 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALFQ53S48 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALFQ53S48 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.68■□□□□ 0.9
ALFQ53S48 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.68■□□□□ 0.9
ALFQ53S48 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
ALFQ53S48 AC005829.2-201ENST00000571422 1056 ntBASIC20.68■□□□□ 0.9
ALFQ53S48 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ALFQ53S48 AC006557.6-201ENST00000623071 864 ntBASIC20.68■□□□□ 0.9
ALFQ53S48 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ALFQ53S48 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ALFQ53S48 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.67■□□□□ 0.9
ALFQ53S48 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALFQ53S48 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALFQ53S48 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALFQ53S48 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALFQ53S48 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ALFQ53S48 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALFQ53S48 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.67■□□□□ 0.9
ALFQ53S48 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.67■□□□□ 0.9
ALFQ53S48 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ALFQ53S48 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.67■□□□□ 0.9
ALFQ53S48 AC008403.3-201ENST00000598924 454 ntBASIC20.67■□□□□ 0.9
ALFQ53S48 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.67■□□□□ 0.9
ALFQ53S48 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALFQ53S48 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALFQ53S48 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALFQ53S48 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALFQ53S48 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALFQ53S48 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ALFQ53S48 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.67■□□□□ 0.9
ALFQ53S48 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.67■□□□□ 0.9
ALFQ53S48 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ALFQ53S48 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.67■□□□□ 0.9
ALFQ53S48 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ALFQ53S48 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALFQ53S48 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ALFQ53S48 LINC01006-201ENST00000333319 2292 ntBASIC20.66■□□□□ 0.9
ALFQ53S48 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ALFQ53S48 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ALFQ53S48 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALFQ53S48 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
ALFQ53S48 ABHD17AP1-201ENST00000358206 933 ntBASIC20.66■□□□□ 0.9
ALFQ53S48 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALFQ53S48 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.66■□□□□ 0.9
ALFQ53S48 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.66■□□□□ 0.9
ALFQ53S48 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ALFQ53S48 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ALFQ53S48 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.66■□□□□ 0.9
ALFQ53S48 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ALFQ53S48 AC023632.3-201ENST00000521633 145 ntBASIC20.66■□□□□ 0.9
ALFQ53S48 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.66■□□□□ 0.9
ALFQ53S48 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALFQ53S48 SOX15-203ENST00000570788 1093 ntBASIC20.66■□□□□ 0.9
ALFQ53S48 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ALFQ53S48 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ALFQ53S48 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.66■□□□□ 0.9
ALFQ53S48 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALFQ53S48 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ALFQ53S48 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.66■□□□□ 0.9
ALFQ53S48 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms