Protein–RNA interactions for Protein: Q4VNC1

ATP13A4, Probable cation-transporting ATPase 13A4, humanhuman

Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4Q4VNC1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP13A4Q4VNC1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.98■□□□□ 0.95
ATP13A4Q4VNC1 BX119927.1-201ENST00000636596 1552 ntBASIC20.98■□□□□ 0.95
ATP13A4Q4VNC1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP13A4Q4VNC1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP13A4Q4VNC1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.98■□□□□ 0.95
ATP13A4Q4VNC1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.98■□□□□ 0.95
ATP13A4Q4VNC1 AC093787.1-201ENST00000450396 207 ntBASIC20.98■□□□□ 0.95
ATP13A4Q4VNC1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATP13A4Q4VNC1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.98■□□□□ 0.95
ATP13A4Q4VNC1 AC100791.3-201ENST00000617619 330 ntBASIC20.98■□□□□ 0.95
ATP13A4Q4VNC1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP13A4Q4VNC1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.98■□□□□ 0.95
ATP13A4Q4VNC1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP13A4Q4VNC1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP13A4Q4VNC1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.97■□□□□ 0.95
ATP13A4Q4VNC1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
ATP13A4Q4VNC1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP13A4Q4VNC1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP13A4Q4VNC1 KRT18P68-201ENST00000392293 1000 ntBASIC20.97■□□□□ 0.95
ATP13A4Q4VNC1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP13A4Q4VNC1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.97■□□□□ 0.95
ATP13A4Q4VNC1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.97■□□□□ 0.95
ATP13A4Q4VNC1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
ATP13A4Q4VNC1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP13A4Q4VNC1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ATP13A4Q4VNC1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
ATP13A4Q4VNC1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.97■□□□□ 0.95
ATP13A4Q4VNC1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
ATP13A4Q4VNC1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP13A4Q4VNC1 PTBP1P-201ENST00000554374 1601 ntBASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 CYP2T3P-201ENST00000601990 817 ntBASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 AC080038.1-201ENST00000611274 1154 ntBASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP13A4Q4VNC1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
ATP13A4Q4VNC1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.95■□□□□ 0.95
ATP13A4Q4VNC1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.95■□□□□ 0.95
ATP13A4Q4VNC1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 AC069236.1-201ENST00000604339 616 ntBASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 AC010980.2-201ENST00000587099 1412 ntBASIC20.95■□□□□ 0.94
ATP13A4Q4VNC1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.94■□□□□ 0.94
ATP13A4Q4VNC1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ATP13A4Q4VNC1 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.94■□□□□ 0.94
ATP13A4Q4VNC1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP13A4Q4VNC1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms