Protein–RNA interactions for Protein: Q03691

ROT1, Protein ROT1, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ROT1Q03691 CYR1YJL005W 6081 nt2.38□□□□□ -2.03
ROT1Q03691 YMR242W-AYMR242W-A 90 nt2.38□□□□□ -2.03
ROT1Q03691 YOR055WYOR055W 435 nt2.38□□□□□ -2.03
ROT1Q03691 YOR108C-AYOR108C-A 210 nt2.38□□□□□ -2.03
ROT1Q03691 YOR394C-AYOR394C-A 168 nt2.38□□□□□ -2.03
ROT1Q03691 VTC3YPL019C 2508 nt2.38□□□□□ -2.03
ROT1Q03691 VMR1YHL035C 4779 nt2.38□□□□□ -2.03
ROT1Q03691 YDR098C-BYDR098C-B 5268 nt2.37□□□□□ -2.03
ROT1Q03691 YDR210C-DYDR210C-D 5268 nt2.37□□□□□ -2.03
ROT1Q03691 YDR316W-BYDR316W-B 5268 nt2.37□□□□□ -2.03
ROT1Q03691 YDR365W-BYDR365W-B 5268 nt2.37□□□□□ -2.03
ROT1Q03691 YER138CYER138C 5268 nt2.37□□□□□ -2.03
ROT1Q03691 YER160CYER160C 5268 nt2.37□□□□□ -2.03
ROT1Q03691 YGR038C-BYGR038C-B 5268 nt2.37□□□□□ -2.03
ROT1Q03691 YGR161C-DYGR161C-D 5268 nt2.37□□□□□ -2.03
ROT1Q03691 YJR027WYJR027W 5268 nt2.37□□□□□ -2.03
ROT1Q03691 YLR157C-BYLR157C-B 5268 nt2.37□□□□□ -2.03
ROT1Q03691 YML039WYML039W 5268 nt2.37□□□□□ -2.03
ROT1Q03691 YML045WYML045W 5268 nt2.37□□□□□ -2.03
ROT1Q03691 YMR050CYMR050C 5268 nt2.37□□□□□ -2.03
ROT1Q03691 YOL103W-BYOL103W-B 5268 nt2.37□□□□□ -2.03
ROT1Q03691 YBR012W-BYBR012W-B 5271 nt2.37□□□□□ -2.03
ROT1Q03691 YOR142W-BYOR142W-B 5268 nt2.37□□□□□ -2.03
ROT1Q03691 YPL257W-BYPL257W-B 5268 nt2.37□□□□□ -2.03
ROT1Q03691 YPR158W-BYPR158W-B 5271 nt2.37□□□□□ -2.03
ROT1Q03691 TUS1YLR425W 3924 nt2.37□□□□□ -2.03
ROT1Q03691 JSN1YJR091C 3276 nt2.37□□□□□ -2.03
ROT1Q03691 ATP7YKL016C 525 nt2.37□□□□□ -2.03
ROT1Q03691 NOC3YLR002C 1992 nt2.37□□□□□ -2.03
ROT1Q03691 ZIP2YGL249W 2115 nt2.36□□□□□ -2.03
ROT1Q03691 YER053C-AYER053C-A 114 nt2.36□□□□□ -2.03
ROT1Q03691 YCL046WYCL046W 324 nt2.36□□□□□ -2.03
ROT1Q03691 SWR1YDR334W 4545 nt2.36□□□□□ -2.03
ROT1Q03691 SRB8YCR081W 4284 nt2.35□□□□□ -2.03
ROT1Q03691 PIP2YOR363C 2991 nt2.35□□□□□ -2.03
ROT1Q03691 YLR035C-AYLR035C-A 3468 nt2.35□□□□□ -2.03
ROT1Q03691 PMP2YEL017C-A 132 nt2.35□□□□□ -2.03
ROT1Q03691 YPL044CYPL044C 549 nt2.35□□□□□ -2.03
ROT1Q03691 PHO91YNR013C 2685 nt2.35□□□□□ -2.03
ROT1Q03691 SRO77YBL106C 3033 nt2.35□□□□□ -2.03
ROT1Q03691 HOS4YIL112W 3252 nt2.34□□□□□ -2.03
ROT1Q03691 ENV11YGR071C 2583 nt2.34□□□□□ -2.03
ROT1Q03691 MET6YER091C 2304 nt2.34□□□□□ -2.03
ROT1Q03691 SBH1YER087C-B 249 nt2.34□□□□□ -2.03
ROT1Q03691 YNL103W-AYNL103W-A 90 nt2.34□□□□□ -2.03
ROT1Q03691 NUM1YDR150W 8247 nt2.34□□□□□ -2.03
ROT1Q03691 MSB1YOR188W 3414 nt2.34□□□□□ -2.04
ROT1Q03691 MAD1YGL086W 2250 nt2.34□□□□□ -2.04
ROT1Q03691 SAS3YBL052C 2496 nt2.33□□□□□ -2.04
ROT1Q03691 HSH155YMR288W 2916 nt2.33□□□□□ -2.04
ROT1Q03691 YCR102W-AYCR102W-A 198 nt2.33□□□□□ -2.04
ROT1Q03691 RPL31AYDL075W 342 nt2.33□□□□□ -2.04
ROT1Q03691 VPS8YAL002W 3825 nt2.33□□□□□ -2.04
ROT1Q03691 YPR203WYPR203W 309 nt2.33□□□□□ -2.04
ROT1Q03691 YBR099CYBR099C 384 nt2.33□□□□□ -2.04
ROT1Q03691 CAT2YML042W 2013 nt2.33□□□□□ -2.04
ROT1Q03691 ARP8YOR141C 2646 nt2.33□□□□□ -2.04
ROT1Q03691 CTF4YPR135W 2784 nt2.32□□□□□ -2.04
ROT1Q03691 SCP160YJL080C 3669 nt2.32□□□□□ -2.04
ROT1Q03691 AHC1YOR023C 1701 nt2.32□□□□□ -2.04
ROT1Q03691 PDR11YIL013C 4236 nt2.32□□□□□ -2.04
ROT1Q03691 ZIP1YDR285W 2628 nt2.32□□□□□ -2.04
ROT1Q03691 MMS1YPR164W 4224 nt2.31□□□□□ -2.04
ROT1Q03691 snR61snR61 90 nt2.31□□□□□ -2.04
ROT1Q03691 YFR012W-AYFR012W-A 87 nt2.31□□□□□ -2.04
ROT1Q03691 KTI11YBL071W-A 249 nt2.31□□□□□ -2.04
ROT1Q03691 STE11YLR362W 2154 nt2.31□□□□□ -2.04
ROT1Q03691 YBT1YLL048C 4986 nt2.31□□□□□ -2.04
ROT1Q03691 SMC6YLR383W 3345 nt2.3□□□□□ -2.04
ROT1Q03691 SLD3YGL113W 2007 nt2.3□□□□□ -2.04
ROT1Q03691 PTP2YOR208W 2253 nt2.3□□□□□ -2.04
ROT1Q03691 PBY1YBR094W 2262 nt2.3□□□□□ -2.04
ROT1Q03691 NOP14YDL148C 2433 nt2.3□□□□□ -2.04
ROT1Q03691 APL2YKL135C 2181 nt2.3□□□□□ -2.04
ROT1Q03691 SGS1YMR190C 4344 nt2.29□□□□□ -2.04
ROT1Q03691 PAA1YDR071C 576 nt2.29□□□□□ -2.04
ROT1Q03691 YHR086W-AYHR086W-A 162 nt2.29□□□□□ -2.04
ROT1Q03691 YIL134C-AYIL134C-A 204 nt2.29□□□□□ -2.04
ROT1Q03691 AMS1YGL156W 3252 nt2.29□□□□□ -2.04
ROT1Q03691 IFH1YLR223C 3258 nt2.29□□□□□ -2.04
ROT1Q03691 YCR095W-AYCR095W-A 159 nt2.28□□□□□ -2.04
ROT1Q03691 DCP2YNL118C 2913 nt2.28□□□□□ -2.04
ROT1Q03691 EDS1YBR033W 2760 nt2.28□□□□□ -2.04
ROT1Q03691 MRD1YPR112C 2664 nt2.28□□□□□ -2.04
ROT1Q03691 SBE22YHR103W 2559 nt2.27□□□□□ -2.05
ROT1Q03691 YLR282CYLR282C 342 nt2.27□□□□□ -2.05
ROT1Q03691 YBR206WYBR206W 324 nt2.27□□□□□ -2.05
ROT1Q03691 MET18YIL128W 3099 nt2.27□□□□□ -2.05
ROT1Q03691 YDR209CYDR209C 414 nt2.25□□□□□ -2.05
ROT1Q03691 tL(UAA)QtL(UAA)Q 85 nt2.25□□□□□ -2.05
ROT1Q03691 YNL067W-BYNL067W-B 141 nt2.25□□□□□ -2.05
ROT1Q03691 YNL211CYNL211C 261 nt2.25□□□□□ -2.05
ROT1Q03691 CDC31YOR257W 486 nt2.25□□□□□ -2.05
ROT1Q03691 DGR2YKL121W 2559 nt2.25□□□□□ -2.05
ROT1Q03691 ESC1YMR219W 4977 nt2.24□□□□□ -2.05
ROT1Q03691 OST4YDL232W 111 nt2.24□□□□□ -2.05
ROT1Q03691 TRS130YMR218C 3309 nt2.24□□□□□ -2.05
ROT1Q03691 YNL018CYNL018C 1839 nt2.24□□□□□ -2.05
ROT1Q03691 MAK10YEL053C 2202 nt2.23□□□□□ -2.05
ROT1Q03691 FLO11YIR019C 4104 nt2.23□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 31.1 ms