Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.32■□□□□ 0.52
SIRPAP78324 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPAP78324 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.32■□□□□ 0.52
SIRPAP78324 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPAP78324 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPAP78324 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SIRPAP78324 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIRPAP78324 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIRPAP78324 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.31■□□□□ 0.52
SIRPAP78324 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
SIRPAP78324 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SIRPAP78324 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SIRPAP78324 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.31■□□□□ 0.52
SIRPAP78324 DUSP5P2-201ENST00000426873 1033 ntBASIC18.31■□□□□ 0.52
SIRPAP78324 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.31■□□□□ 0.52
SIRPAP78324 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.31■□□□□ 0.52
SIRPAP78324 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.31■□□□□ 0.52
SIRPAP78324 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SIRPAP78324 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SIRPAP78324 AC007952.6-201ENST00000573168 2673 ntBASIC18.31■□□□□ 0.52
SIRPAP78324 AC003957.1-201ENST00000625108 2673 ntBASIC18.31■□□□□ 0.52
SIRPAP78324 AFG3L1P-217ENST00000557444 2447 ntBASIC18.31■□□□□ 0.52
SIRPAP78324 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.31■□□□□ 0.52
SIRPAP78324 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.31■□□□□ 0.52
SIRPAP78324 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.31■□□□□ 0.52
SIRPAP78324 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.31■□□□□ 0.52
SIRPAP78324 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPAP78324 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPAP78324 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPAP78324 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SIRPAP78324 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SIRPAP78324 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SIRPAP78324 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SIRPAP78324 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
SIRPAP78324 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPAP78324 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SIRPAP78324 KRT17P1-201ENST00000399211 1546 ntBASIC18.3■□□□□ 0.52
SIRPAP78324 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPAP78324 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
SIRPAP78324 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPAP78324 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPAP78324 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.3■□□□□ 0.52
SIRPAP78324 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPAP78324 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.3■□□□□ 0.52
SIRPAP78324 TSPY20P-201ENST00000450910 630 ntBASIC18.3■□□□□ 0.52
SIRPAP78324 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.3■□□□□ 0.52
SIRPAP78324 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.3■□□□□ 0.52
SIRPAP78324 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.3■□□□□ 0.52
SIRPAP78324 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.3■□□□□ 0.52
SIRPAP78324 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPAP78324 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPAP78324 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SIRPAP78324 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
SIRPAP78324 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPAP78324 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.3■□□□□ 0.52
SIRPAP78324 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPAP78324 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.3■□□□□ 0.52
SIRPAP78324 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPAP78324 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPAP78324 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPAP78324 AC116050.2-201ENST00000612102 1779 ntBASIC18.3■□□□□ 0.52
SIRPAP78324 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SIRPAP78324 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPAP78324 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SIRPAP78324 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SIRPAP78324 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPAP78324 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPAP78324 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
SIRPAP78324 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPAP78324 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPAP78324 ABHD17AP1-201ENST00000358206 933 ntBASIC18.29■□□□□ 0.52
SIRPAP78324 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.29■□□□□ 0.52
SIRPAP78324 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.29■□□□□ 0.52
SIRPAP78324 AC097658.1-201ENST00000475555 843 ntBASIC18.29■□□□□ 0.52
SIRPAP78324 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.29■□□□□ 0.52
SIRPAP78324 MIR4651-201ENST00000582622 73 ntBASIC18.29■□□□□ 0.52
SIRPAP78324 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
SIRPAP78324 CYP2T3P-201ENST00000601990 817 ntBASIC18.29■□□□□ 0.52
SIRPAP78324 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.29■□□□□ 0.52
SIRPAP78324 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SIRPAP78324 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SIRPAP78324 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPAP78324 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPAP78324 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SIRPAP78324 FP700111.2-201ENST00000619190 1892 ntBASIC18.29■□□□□ 0.52
SIRPAP78324 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIRPAP78324 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SIRPAP78324 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIRPAP78324 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SIRPAP78324 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIRPAP78324 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SIRPAP78324 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SIRPAP78324 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SIRPAP78324 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIRPAP78324 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIRPAP78324 AL162377.1-201ENST00000618844 1793 ntBASIC18.28■□□□□ 0.52
SIRPAP78324 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIRPAP78324 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SIRPAP78324 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SIRPAP78324 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms