Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
YBX1P67809 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
YBX1P67809 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
YBX1P67809 SLC29A4P1-201ENST00000398760 971 ntBASIC19.64■□□□□ 0.73
YBX1P67809 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.64■□□□□ 0.73
YBX1P67809 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.64■□□□□ 0.73
YBX1P67809 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.64■□□□□ 0.73
YBX1P67809 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
YBX1P67809 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
YBX1P67809 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
YBX1P67809 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.64■□□□□ 0.73
YBX1P67809 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
YBX1P67809 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
YBX1P67809 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
YBX1P67809 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
YBX1P67809 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
YBX1P67809 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
YBX1P67809 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.63■□□□□ 0.73
YBX1P67809 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.63■□□□□ 0.73
YBX1P67809 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.63■□□□□ 0.73
YBX1P67809 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
YBX1P67809 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
YBX1P67809 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
YBX1P67809 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
YBX1P67809 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.63■□□□□ 0.73
YBX1P67809 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.63■□□□□ 0.73
YBX1P67809 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.63■□□□□ 0.73
YBX1P67809 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.63■□□□□ 0.73
YBX1P67809 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.63■□□□□ 0.73
YBX1P67809 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
YBX1P67809 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.63■□□□□ 0.73
YBX1P67809 AL356652.1-201ENST00000615962 565 ntBASIC19.63■□□□□ 0.73
YBX1P67809 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
YBX1P67809 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
YBX1P67809 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.63■□□□□ 0.73
YBX1P67809 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.63■□□□□ 0.73
YBX1P67809 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
YBX1P67809 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
YBX1P67809 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
YBX1P67809 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
YBX1P67809 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
YBX1P67809 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
YBX1P67809 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
YBX1P67809 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
YBX1P67809 KRT8P36-201ENST00000489121 1440 ntBASIC19.62■□□□□ 0.73
YBX1P67809 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
YBX1P67809 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
YBX1P67809 AC142086.2-201ENST00000569753 217 ntBASIC19.62■□□□□ 0.73
YBX1P67809 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.62■□□□□ 0.73
YBX1P67809 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
YBX1P67809 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.62■□□□□ 0.73
YBX1P67809 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
YBX1P67809 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.62■□□□□ 0.73
YBX1P67809 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
YBX1P67809 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
YBX1P67809 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.62■□□□□ 0.73
YBX1P67809 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
YBX1P67809 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.62■□□□□ 0.73
YBX1P67809 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
YBX1P67809 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
YBX1P67809 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
YBX1P67809 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
YBX1P67809 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
YBX1P67809 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
YBX1P67809 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
YBX1P67809 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
YBX1P67809 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
YBX1P67809 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
YBX1P67809 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
YBX1P67809 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
YBX1P67809 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
YBX1P67809 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
YBX1P67809 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
YBX1P67809 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.61■□□□□ 0.73
YBX1P67809 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
YBX1P67809 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.61■□□□□ 0.73
YBX1P67809 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
YBX1P67809 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
YBX1P67809 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
YBX1P67809 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.61■□□□□ 0.73
YBX1P67809 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.61■□□□□ 0.73
YBX1P67809 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
YBX1P67809 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.61■□□□□ 0.73
YBX1P67809 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
YBX1P67809 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
YBX1P67809 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
YBX1P67809 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.6■□□□□ 0.73
YBX1P67809 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.6■□□□□ 0.73
YBX1P67809 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
YBX1P67809 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
YBX1P67809 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
YBX1P67809 LSM12P1-201ENST00000411836 588 ntBASIC19.6■□□□□ 0.73
YBX1P67809 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.6■□□□□ 0.73
YBX1P67809 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
YBX1P67809 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.6■□□□□ 0.73
YBX1P67809 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
YBX1P67809 AC105020.6-201ENST00000621523 1217 ntBASIC19.6■□□□□ 0.73
YBX1P67809 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
YBX1P67809 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
YBX1P67809 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms