Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PMS2P54278 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.73■□□□□ 0.91
PMS2P54278 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.73■□□□□ 0.91
PMS2P54278 AC005332.7-201ENST00000614046 2005 ntBASIC20.73■□□□□ 0.91
PMS2P54278 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PMS2P54278 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PMS2P54278 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
PMS2P54278 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PMS2P54278 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.72■□□□□ 0.91
PMS2P54278 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PMS2P54278 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PMS2P54278 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PMS2P54278 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.72■□□□□ 0.91
PMS2P54278 POU5F1P4-201ENST00000413175 1085 ntBASIC20.72■□□□□ 0.91
PMS2P54278 AC008175.2-201ENST00000612840 297 ntBASIC20.72■□□□□ 0.91
PMS2P54278 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PMS2P54278 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PMS2P54278 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PMS2P54278 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.72■□□□□ 0.91
PMS2P54278 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PMS2P54278 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS2P54278 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.71■□□□□ 0.91
PMS2P54278 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS2P54278 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS2P54278 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PMS2P54278 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PMS2P54278 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS2P54278 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS2P54278 AC004911.1-201ENST00000416316 871 ntBASIC20.71■□□□□ 0.91
PMS2P54278 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.71■□□□□ 0.91
PMS2P54278 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.71■□□□□ 0.91
PMS2P54278 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.71■□□□□ 0.91
PMS2P54278 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.71■□□□□ 0.91
PMS2P54278 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.71■□□□□ 0.91
PMS2P54278 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PMS2P54278 AL691432.2-201ENST00000607222 2038 ntBASIC20.71■□□□□ 0.91
PMS2P54278 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS2P54278 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS2P54278 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.71■□□□□ 0.91
PMS2P54278 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.71■□□□□ 0.91
PMS2P54278 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS2P54278 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.71■□□□□ 0.91
PMS2P54278 LINC02228-203ENST00000641970 1355 ntBASIC20.71■□□□□ 0.91
PMS2P54278 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PMS2P54278 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.71■□□□□ 0.91
PMS2P54278 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.7■□□□□ 0.91
PMS2P54278 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.7■□□□□ 0.91
PMS2P54278 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
PMS2P54278 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PMS2P54278 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PMS2P54278 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS2P54278 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS2P54278 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS2P54278 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PMS2P54278 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.7■□□□□ 0.9
PMS2P54278 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
PMS2P54278 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS2P54278 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS2P54278 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS2P54278 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.7■□□□□ 0.9
PMS2P54278 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.7■□□□□ 0.9
PMS2P54278 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.7■□□□□ 0.9
PMS2P54278 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PMS2P54278 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PMS2P54278 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS2P54278 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS2P54278 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.7■□□□□ 0.9
PMS2P54278 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PMS2P54278 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS2P54278 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PMS2P54278 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS2P54278 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PMS2P54278 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.7■□□□□ 0.9
PMS2P54278 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.69■□□□□ 0.9
PMS2P54278 AC004408.2-201ENST00000623613 2777 ntBASIC20.69■□□□□ 0.9
PMS2P54278 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PMS2P54278 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PMS2P54278 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.69■□□□□ 0.9
PMS2P54278 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PMS2P54278 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
PMS2P54278 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.69■□□□□ 0.9
PMS2P54278 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PMS2P54278 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.69■□□□□ 0.9
PMS2P54278 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PMS2P54278 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PMS2P54278 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.69■□□□□ 0.9
PMS2P54278 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.69■□□□□ 0.9
PMS2P54278 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PMS2P54278 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.69■□□□□ 0.9
PMS2P54278 KRT18P14-201ENST00000534205 1250 ntBASIC20.69■□□□□ 0.9
PMS2P54278 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.69■□□□□ 0.9
PMS2P54278 TERF1P2-201ENST00000583350 1212 ntBASIC20.69■□□□□ 0.9
PMS2P54278 NTF6G-201ENST00000591094 616 ntBASIC20.69■□□□□ 0.9
PMS2P54278 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PMS2P54278 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.69■□□□□ 0.9
PMS2P54278 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PMS2P54278 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PMS2P54278 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.69■□□□□ 0.9
PMS2P54278 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PMS2P54278 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms