Protein–RNA interactions for Protein: P53600

RET3, Coatomer subunit zeta, yeastyeast

Predictions only

Length 189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RET3P53600 VPS54YDR027C 2670 nt1.26□□□□□ -2.21
RET3P53600 YAP6YDR259C 1152 nt1.26□□□□□ -2.21
RET3P53600 YKL202WYKL202W 582 nt1.26□□□□□ -2.21
RET3P53600 SDH2YLL041C 801 nt1.26□□□□□ -2.21
RET3P53600 RRT15YLR162W-A 189 nt1.26□□□□□ -2.21
RET3P53600 YMR141W-AYMR141W-A 225 nt1.26□□□□□ -2.21
RET3P53600 YDL211CYDL211C 1119 nt1.25□□□□□ -2.21
RET3P53600 AGA2YGL032C 264 nt1.25□□□□□ -2.21
RET3P53600 YLR222C-AYLR222C-A 231 nt1.25□□□□□ -2.21
RET3P53600 YMR175W-AYMR175W-A 195 nt1.25□□□□□ -2.21
RET3P53600 YPL185WYPL185W 396 nt1.25□□□□□ -2.21
RET3P53600 NUT2YPR168W 474 nt1.25□□□□□ -2.21
RET3P53600 ROM2YLR371W 4071 nt1.24□□□□□ -2.21
RET3P53600 YDR182W-AYDR182W-A 204 nt1.24□□□□□ -2.21
RET3P53600 YIL020C-AYIL020C-A 339 nt1.24□□□□□ -2.21
RET3P53600 YLR434CYLR434C 384 nt1.24□□□□□ -2.21
RET3P53600 ISF1YMR081C 1017 nt1.24□□□□□ -2.21
RET3P53600 YGR174W-AYGR174W-A 87 nt1.23□□□□□ -2.21
RET3P53600 RPB10YOR210W 213 nt1.23□□□□□ -2.21
RET3P53600 snR14snR14 160 nt1.23□□□□□ -2.21
RET3P53600 SPT7YBR081C 3999 nt1.23□□□□□ -2.21
RET3P53600 APL2YKL135C 2181 nt1.23□□□□□ -2.21
RET3P53600 ENV11YGR071C 2583 nt1.22□□□□□ -2.21
RET3P53600 MUK1YPL070W 1839 nt1.22□□□□□ -2.21
RET3P53600 NUP188YML103C 4968 nt1.22□□□□□ -2.21
RET3P53600 SWF1YDR126W 1011 nt1.22□□□□□ -2.21
RET3P53600 YHL041WYHL041W 450 nt1.22□□□□□ -2.21
RET3P53600 UPS1YLR193C 528 nt1.22□□□□□ -2.21
RET3P53600 YSY6YBR162W-A 198 nt1.22□□□□□ -2.21
RET3P53600 SCW11YGL028C 1629 nt1.22□□□□□ -2.21
RET3P53600 YER079WYER079W 633 nt1.21□□□□□ -2.22
RET3P53600 CLU1YMR012W 3834 nt1.21□□□□□ -2.22
RET3P53600 NUT1YGL151W 3399 nt1.2□□□□□ -2.22
RET3P53600 VAR1Q0140 1197 nt1.2□□□□□ -2.22
RET3P53600 YBR285WYBR285W 435 nt1.2□□□□□ -2.22
RET3P53600 YMR242W-AYMR242W-A 90 nt1.19□□□□□ -2.22
RET3P53600 YOR161W-BYOR161W-B 261 nt1.19□□□□□ -2.22
RET3P53600 snR51snR51 107 nt1.19□□□□□ -2.22
RET3P53600 SPT21YMR179W 2277 nt1.19□□□□□ -2.22
RET3P53600 ZIP2YGL249W 2115 nt1.19□□□□□ -2.22
RET3P53600 MPT5YGL178W 2580 nt1.18□□□□□ -2.22
RET3P53600 YLL020CYLL020C 306 nt1.18□□□□□ -2.22
RET3P53600 YMR001C-AYMR001C-A 231 nt1.18□□□□□ -2.22
RET3P53600 YPR063CYPR063C 423 nt1.18□□□□□ -2.22
RET3P53600 AIM44YPL158C 2277 nt1.18□□□□□ -2.22
RET3P53600 NPC2YDL046W 522 nt1.17□□□□□ -2.22
RET3P53600 YOR053WYOR053W 342 nt1.17□□□□□ -2.22
RET3P53600 YJR029WYJR029W 5268 nt1.17□□□□□ -2.22
RET3P53600 YPR137C-BYPR137C-B 5268 nt1.17□□□□□ -2.22
RET3P53600 SWI4YER111C 3282 nt1.16□□□□□ -2.22
RET3P53600 snR72snR72 98 nt1.16□□□□□ -2.22
RET3P53600 YNL058CYNL058C 951 nt1.16□□□□□ -2.22
RET3P53600 LEE1YPL054W 906 nt1.16□□□□□ -2.22
RET3P53600 RRT1YBL048W 312 nt1.15□□□□□ -2.23
RET3P53600 YOR108C-AYOR108C-A 210 nt1.15□□□□□ -2.23
RET3P53600 BEM2YER155C 6504 nt1.15□□□□□ -2.23
RET3P53600 APL1YJR005W 2103 nt1.15□□□□□ -2.23
RET3P53600 SLI15YBR156C 2097 nt1.14□□□□□ -2.23
RET3P53600 MDS3YGL197W 4464 nt1.14□□□□□ -2.23
RET3P53600 PAC1YOR269W 1485 nt1.14□□□□□ -2.23
RET3P53600 STF2YGR008C 255 nt1.14□□□□□ -2.23
RET3P53600 YHR138CYHR138C 345 nt1.14□□□□□ -2.23
RET3P53600 BSC3YLR465C 309 nt1.14□□□□□ -2.23
RET3P53600 YOR199WYOR199W 330 nt1.14□□□□□ -2.23
RET3P53600 LCD1YDR499W 2244 nt1.13□□□□□ -2.23
RET3P53600 YJR003CYJR003C 1560 nt1.13□□□□□ -2.23
RET3P53600 VAM6YDL077C 3150 nt1.13□□□□□ -2.23
RET3P53600 YJL135WYJL135W 318 nt1.13□□□□□ -2.23
RET3P53600 YLR154W-FYLR154W-F 141 nt1.13□□□□□ -2.23
RET3P53600 FIG4YNL325C 2640 nt1.13□□□□□ -2.23
RET3P53600 INP2YMR163C 2118 nt1.12□□□□□ -2.23
RET3P53600 YER137W-AYER137W-A 306 nt1.12□□□□□ -2.23
RET3P53600 YOL160WYOL160W 342 nt1.12□□□□□ -2.23
RET3P53600 APL3YBL037W 3078 nt1.12□□□□□ -2.23
RET3P53600 YCS4YLR272C 3531 nt1.11□□□□□ -2.23
RET3P53600 SEC3YER008C 4011 nt1.11□□□□□ -2.23
RET3P53600 RPL34BYIL052C 366 nt1.1□□□□□ -2.23
RET3P53600 YMR290W-AYMR290W-A 348 nt1.1□□□□□ -2.23
RET3P53600 YBR012CYBR012C 420 nt1.1□□□□□ -2.23
RET3P53600 YPL261CYPL261C 309 nt1.1□□□□□ -2.23
RET3P53600 YBR221W-AYBR221W-A 105 nt1.1□□□□□ -2.23
RET3P53600 COG4YPR105C 2586 nt1.1□□□□□ -2.23
RET3P53600 NUP145YGL092W 3954 nt1.09□□□□□ -2.23
RET3P53600 MMS4YBR098W 2076 nt1.09□□□□□ -2.23
RET3P53600 SET3YKR029C 2256 nt1.09□□□□□ -2.23
RET3P53600 EMT1tM(CAU)D 73 nt1.09□□□□□ -2.23
RET3P53600 EMT5tM(CAU)J1 73 nt1.09□□□□□ -2.23
RET3P53600 EMT3tM(CAU)J2 73 nt1.09□□□□□ -2.23
RET3P53600 EMT4tM(CAU)M 73 nt1.09□□□□□ -2.23
RET3P53600 EMT2tM(CAU)O2 73 nt1.09□□□□□ -2.23
RET3P53600 HUG1YML058W-A 207 nt1.09□□□□□ -2.23
RET3P53600 IRC23YOR044W 474 nt1.09□□□□□ -2.23
RET3P53600 YOR072W-AYOR072W-A 249 nt1.09□□□□□ -2.23
RET3P53600 YOR293C-AYOR293C-A 150 nt1.09□□□□□ -2.23
RET3P53600 EAF1YDR359C 2949 nt1.09□□□□□ -2.24
RET3P53600 ATG31YDR022C 591 nt1.08□□□□□ -2.24
RET3P53600 RPS20YHL015W 366 nt1.08□□□□□ -2.24
RET3P53600 YAL068W-AYAL068W-A 255 nt1.08□□□□□ -2.24
RET3P53600 YOR121CYOR121C 306 nt1.08□□□□□ -2.24
RET3P53600 STO1YMR125W 2586 nt1.08□□□□□ -2.24
Retrieved 100 of 7,029 protein–RNA pairs in 37.5 ms