Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LBX1P52954 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LBX1P52954 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.04■■□□□ 1.28
LBX1P52954 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
LBX1P52954 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.04■■□□□ 1.28
LBX1P52954 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LBX1P52954 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
LBX1P52954 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LBX1P52954 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LBX1P52954 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
LBX1P52954 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LBX1P52954 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LBX1P52954 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LBX1P52954 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.03■■□□□ 1.28
LBX1P52954 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC23.03■■□□□ 1.28
LBX1P52954 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC23.03■■□□□ 1.28
LBX1P52954 AC092119.3-201ENST00000612618 583 ntBASIC23.03■■□□□ 1.28
LBX1P52954 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
LBX1P52954 LINC01124-201ENST00000409786 2117 ntBASIC23.03■■□□□ 1.28
LBX1P52954 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.03■■□□□ 1.28
LBX1P52954 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.03■■□□□ 1.28
LBX1P52954 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
LBX1P52954 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.03■■□□□ 1.28
LBX1P52954 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LBX1P52954 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.02■■□□□ 1.28
LBX1P52954 AC139530.1-201ENST00000575312 1977 ntBASIC23.02■■□□□ 1.28
LBX1P52954 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LBX1P52954 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.02■■□□□ 1.28
LBX1P52954 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LBX1P52954 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
LBX1P52954 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC23.02■■□□□ 1.28
LBX1P52954 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC23.02■■□□□ 1.28
LBX1P52954 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC23.02■■□□□ 1.28
LBX1P52954 KRT18P38-201ENST00000449496 1282 ntBASIC23.02■■□□□ 1.28
LBX1P52954 PRSS44-201ENST00000515154 1146 ntBASIC23.02■■□□□ 1.28
LBX1P52954 AC140113.3-201ENST00000605663 199 ntBASIC23.02■■□□□ 1.28
LBX1P52954 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LBX1P52954 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.02■■□□□ 1.28
LBX1P52954 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.01■■□□□ 1.27
LBX1P52954 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.01■■□□□ 1.27
LBX1P52954 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LBX1P52954 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC23.01■■□□□ 1.27
LBX1P52954 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
LBX1P52954 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LBX1P52954 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC23.01■■□□□ 1.27
LBX1P52954 AL441883.1-201ENST00000566170 1045 ntBASIC23.01■■□□□ 1.27
LBX1P52954 CYGB-204ENST00000589342 815 ntTSL 3 BASIC23.01■■□□□ 1.27
LBX1P52954 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC23.01■■□□□ 1.27
LBX1P52954 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC23.01■■□□□ 1.27
LBX1P52954 AC008622.2-201ENST00000617006 1229 ntBASIC23.01■■□□□ 1.27
LBX1P52954 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LBX1P52954 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LBX1P52954 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LBX1P52954 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LBX1P52954 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC23■■□□□ 1.27
LBX1P52954 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23■■□□□ 1.27
LBX1P52954 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23■■□□□ 1.27
LBX1P52954 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23■■□□□ 1.27
LBX1P52954 CCR12P-201ENST00000446203 998 ntBASIC23■■□□□ 1.27
LBX1P52954 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
LBX1P52954 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LBX1P52954 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23■■□□□ 1.27
LBX1P52954 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LBX1P52954 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
LBX1P52954 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
LBX1P52954 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LBX1P52954 HLA-G-203ENST00000376818 1127 ntBASIC22.99■■□□□ 1.27
LBX1P52954 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LBX1P52954 AC023632.3-201ENST00000521633 145 ntBASIC22.99■■□□□ 1.27
LBX1P52954 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC22.99■■□□□ 1.27
LBX1P52954 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LBX1P52954 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LBX1P52954 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC22.99■■□□□ 1.27
LBX1P52954 AL023973.1-201ENST00000624619 620 ntBASIC22.99■■□□□ 1.27
LBX1P52954 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC22.99■■□□□ 1.27
LBX1P52954 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
LBX1P52954 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LBX1P52954 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LBX1P52954 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.98■■□□□ 1.27
LBX1P52954 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LBX1P52954 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LBX1P52954 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC22.98■■□□□ 1.27
LBX1P52954 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.98■■□□□ 1.27
LBX1P52954 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
LBX1P52954 NPAP1P7-201ENST00000613027 823 ntBASIC22.98■■□□□ 1.27
LBX1P52954 AL445675.2-201ENST00000620291 557 ntBASIC22.98■■□□□ 1.27
LBX1P52954 AC092068.2-201ENST00000590491 1708 ntBASIC22.98■■□□□ 1.27
LBX1P52954 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LBX1P52954 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC22.98■■□□□ 1.27
LBX1P52954 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
LBX1P52954 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LBX1P52954 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LBX1P52954 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LBX1P52954 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
LBX1P52954 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
LBX1P52954 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LBX1P52954 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LBX1P52954 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LBX1P52954 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LBX1P52954 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms