Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN2P51788 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLCN2P51788 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN2P51788 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN2P51788 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN2P51788 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN2P51788 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN2P51788 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN2P51788 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CLCN2P51788 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN2P51788 MIR663A-201ENST00000385250 93 ntBASIC19.44■□□□□ 0.7
CLCN2P51788 CROCCP5-201ENST00000436658 830 ntBASIC19.44■□□□□ 0.7
CLCN2P51788 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN2P51788 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN2P51788 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.44■□□□□ 0.7
CLCN2P51788 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CLCN2P51788 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN2P51788 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN2P51788 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
CLCN2P51788 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN2P51788 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN2P51788 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN2P51788 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN2P51788 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.44■□□□□ 0.7
CLCN2P51788 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLCN2P51788 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.43■□□□□ 0.7
CLCN2P51788 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.43■□□□□ 0.7
CLCN2P51788 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.43■□□□□ 0.7
CLCN2P51788 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN2P51788 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN2P51788 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN2P51788 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CLCN2P51788 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLCN2P51788 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCN2P51788 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.43■□□□□ 0.7
CLCN2P51788 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN2P51788 AC121338.2-201ENST00000622535 1744 ntBASIC19.42■□□□□ 0.7
CLCN2P51788 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN2P51788 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN2P51788 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CLCN2P51788 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN2P51788 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CLCN2P51788 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.42■□□□□ 0.7
CLCN2P51788 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN2P51788 CNN2P6-201ENST00000439038 900 ntBASIC19.42■□□□□ 0.7
CLCN2P51788 AC007322.4-201ENST00000509611 723 ntBASIC19.42■□□□□ 0.7
CLCN2P51788 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCN2P51788 AC005181.1-201ENST00000604782 1256 ntBASIC19.42■□□□□ 0.7
CLCN2P51788 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN2P51788 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CLCN2P51788 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.42■□□□□ 0.7
CLCN2P51788 AC116562.4-201ENST00000641316 2276 ntBASIC19.42■□□□□ 0.7
CLCN2P51788 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CLCN2P51788 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.42■□□□□ 0.7
CLCN2P51788 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.41■□□□□ 0.7
CLCN2P51788 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN2P51788 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN2P51788 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN2P51788 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CLCN2P51788 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN2P51788 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CLCN2P51788 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.41■□□□□ 0.7
CLCN2P51788 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN2P51788 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.41■□□□□ 0.7
CLCN2P51788 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CLCN2P51788 ID1-201ENST00000376105 1233 ntBASIC19.41■□□□□ 0.7
CLCN2P51788 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.41■□□□□ 0.7
CLCN2P51788 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN2P51788 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN2P51788 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.41■□□□□ 0.7
CLCN2P51788 AC243732.1-201ENST00000612648 864 ntBASIC19.41■□□□□ 0.7
CLCN2P51788 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.41■□□□□ 0.7
CLCN2P51788 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.41■□□□□ 0.7
CLCN2P51788 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN2P51788 RBM17P2-201ENST00000616397 1405 ntBASIC19.41■□□□□ 0.7
CLCN2P51788 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CLCN2P51788 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN2P51788 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CLCN2P51788 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN2P51788 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCN2P51788 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.4■□□□□ 0.7
CLCN2P51788 AC245052.3-201ENST00000450182 901 ntBASIC19.4■□□□□ 0.7
CLCN2P51788 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCN2P51788 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CLCN2P51788 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.4■□□□□ 0.7
CLCN2P51788 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.4■□□□□ 0.7
CLCN2P51788 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CLCN2P51788 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN2P51788 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.4■□□□□ 0.7
CLCN2P51788 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.4■□□□□ 0.7
CLCN2P51788 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN2P51788 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.4■□□□□ 0.7
CLCN2P51788 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CLCN2P51788 AP000974.1-201ENST00000623909 2387 ntBASIC19.4■□□□□ 0.7
CLCN2P51788 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLCN2P51788 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CLCN2P51788 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.39■□□□□ 0.7
CLCN2P51788 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CLCN2P51788 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
CLCN2P51788 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms