Protein–RNA interactions for Protein: P46669

RPA43, DNA-directed RNA polymerase I subunit RPA43, yeastyeast

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA43P46669 RPS30BYOR182C 192 nt0.76□□□□□ -2.29
RPA43P46669 CDC39YCR093W 6327 nt0.76□□□□□ -2.29
RPA43P46669 YDL206WYDL206W 2289 nt0.75□□□□□ -2.29
RPA43P46669 YMR242W-AYMR242W-A 90 nt0.75□□□□□ -2.29
RPA43P46669 CDC33YOL139C 642 nt0.75□□□□□ -2.29
RPA43P46669 ERP4YOR016C 624 nt0.75□□□□□ -2.29
RPA43P46669 UBP3YER151C 2739 nt0.74□□□□□ -2.29
RPA43P46669 NPC2YDL046W 522 nt0.74□□□□□ -2.29
RPA43P46669 RRT1YBL048W 312 nt0.74□□□□□ -2.29
RPA43P46669 RPB10YOR210W 213 nt0.74□□□□□ -2.29
RPA43P46669 SLI15YBR156C 2097 nt0.74□□□□□ -2.29
RPA43P46669 PDE2YOR360C 1581 nt0.74□□□□□ -2.29
RPA43P46669 ZIP2YGL249W 2115 nt0.73□□□□□ -2.29
RPA43P46669 YER084W-AYER084W-A 513 nt0.73□□□□□ -2.29
RPA43P46669 YHR125WYHR125W 306 nt0.73□□□□□ -2.29
RPA43P46669 YHR130CYHR130C 336 nt0.73□□□□□ -2.29
RPA43P46669 NFU1YKL040C 771 nt0.73□□□□□ -2.29
RPA43P46669 YBR076C-AYBR076C-A 267 nt0.73□□□□□ -2.29
RPA43P46669 YPR117WYPR117W 7470 nt0.72□□□□□ -2.29
RPA43P46669 SLD3YGL113W 2007 nt0.72□□□□□ -2.29
RPA43P46669 YDL158CYDL158C 309 nt0.72□□□□□ -2.29
RPA43P46669 TIM13YGR181W 318 nt0.72□□□□□ -2.29
RPA43P46669 AIM29YKR074W 468 nt0.72□□□□□ -2.29
RPA43P46669 KAP120YPL125W 3099 nt0.71□□□□□ -2.3
RPA43P46669 INA22YIR024C 651 nt0.71□□□□□ -2.3
RPA43P46669 WAR1YML076C 2835 nt0.71□□□□□ -2.3
RPA43P46669 GEA2YEL022W 4380 nt0.71□□□□□ -2.3
RPA43P46669 ENV11YGR071C 2583 nt0.71□□□□□ -2.3
RPA43P46669 YGR290WYGR290W 444 nt0.7□□□□□ -2.3
RPA43P46669 YBL071CYBL071C 309 nt0.7□□□□□ -2.3
RPA43P46669 YOR199WYOR199W 330 nt0.7□□□□□ -2.3
RPA43P46669 YLR287CYLR287C 1068 nt0.69□□□□□ -2.3
RPA43P46669 ZEO1YOL109W 342 nt0.69□□□□□ -2.3
RPA43P46669 IES4YOR189W 351 nt0.69□□□□□ -2.3
RPA43P46669 OST1YJL002C 1431 nt0.69□□□□□ -2.3
RPA43P46669 YAL016C-BYAL016C-B 186 nt0.68□□□□□ -2.3
RPA43P46669 YJR003CYJR003C 1560 nt0.68□□□□□ -2.3
RPA43P46669 YMR141W-AYMR141W-A 225 nt0.68□□□□□ -2.3
RPA43P46669 YNL122CYNL122C 348 nt0.68□□□□□ -2.3
RPA43P46669 YOR108C-AYOR108C-A 210 nt0.68□□□□□ -2.3
RPA43P46669 PAU24YBR301W 363 nt0.68□□□□□ -2.3
RPA43P46669 YDL073WYDL073W 2955 nt0.67□□□□□ -2.3
RPA43P46669 BI2Q0110 1272 nt0.67□□□□□ -2.3
RPA43P46669 YKL202WYKL202W 582 nt0.67□□□□□ -2.3
RPA43P46669 YPR153WYPR153W 423 nt0.67□□□□□ -2.3
RPA43P46669 snR54snR54 86 nt0.67□□□□□ -2.3
RPA43P46669 NUP157YER105C 4176 nt0.67□□□□□ -2.3
RPA43P46669 PKH2YOL100W 3246 nt0.66□□□□□ -2.3
RPA43P46669 YDL011CYDL011C 324 nt0.66□□□□□ -2.3
RPA43P46669 GPG1YGL121C 381 nt0.66□□□□□ -2.3
RPA43P46669 tF(GAA)BtF(GAA)B 73 nt0.65□□□□□ -2.31
RPA43P46669 WIP1YDR374W-A 270 nt0.65□□□□□ -2.31
RPA43P46669 tF(GAA)FtF(GAA)F 73 nt0.65□□□□□ -2.31
RPA43P46669 tF(GAA)GtF(GAA)G 73 nt0.65□□□□□ -2.31
RPA43P46669 tF(GAA)H1tF(GAA)H1 73 nt0.65□□□□□ -2.31
RPA43P46669 tF(GAA)H2tF(GAA)H2 73 nt0.65□□□□□ -2.31
RPA43P46669 tF(GAA)MtF(GAA)M 73 nt0.65□□□□□ -2.31
RPA43P46669 tF(GAA)P1tF(GAA)P1 73 nt0.65□□□□□ -2.31
RPA43P46669 tF(GAA)P2tF(GAA)P2 73 nt0.65□□□□□ -2.31
RPA43P46669 ALG13YGL047W 609 nt0.65□□□□□ -2.31
RPA43P46669 ECL1YGR146C 636 nt0.65□□□□□ -2.31
RPA43P46669 YIL142C-AYIL142C-A 333 nt0.65□□□□□ -2.31
RPA43P46669 YJL020W-AYJL020W-A 258 nt0.65□□□□□ -2.31
RPA43P46669 FYV7YLR068W 456 nt0.65□□□□□ -2.31
RPA43P46669 YMR290W-AYMR290W-A 348 nt0.65□□□□□ -2.31
RPA43P46669 ALY2YJL084C 3141 nt0.64□□□□□ -2.31
RPA43P46669 PRP16YKR086W 3216 nt0.64□□□□□ -2.31
RPA43P46669 YCS4YLR272C 3531 nt0.64□□□□□ -2.31
RPA43P46669 YDL196WYDL196W 330 nt0.64□□□□□ -2.31
RPA43P46669 YJL135WYJL135W 318 nt0.64□□□□□ -2.31
RPA43P46669 YOR072W-AYOR072W-A 249 nt0.64□□□□□ -2.31
RPA43P46669 YOR192C-CYOR192C-C 237 nt0.64□□□□□ -2.31
RPA43P46669 SEC1YDR164C 2175 nt0.64□□□□□ -2.31
RPA43P46669 DBP6YNR038W 1890 nt0.63□□□□□ -2.31
RPA43P46669 snR72snR72 98 nt0.63□□□□□ -2.31
RPA43P46669 YGR042WYGR042W 816 nt0.63□□□□□ -2.31
RPA43P46669 YLR171WYLR171W 390 nt0.63□□□□□ -2.31
RPA43P46669 YPR159C-AYPR159C-A 102 nt0.63□□□□□ -2.31
RPA43P46669 snR51snR51 107 nt0.63□□□□□ -2.31
RPA43P46669 DIE2YGR227W 1578 nt0.62□□□□□ -2.31
RPA43P46669 PAU12YGR294W 363 nt0.62□□□□□ -2.31
RPA43P46669 UTP20YBL004W 7482 nt0.62□□□□□ -2.31
RPA43P46669 YER006C-AYER006C-A 318 nt0.61□□□□□ -2.31
RPA43P46669 YHL041WYHL041W 450 nt0.61□□□□□ -2.31
RPA43P46669 YMR031W-AYMR031W-A 327 nt0.61□□□□□ -2.31
RPA43P46669 YMR272W-AYMR272W-A 114 nt0.61□□□□□ -2.31
RPA43P46669 YOL013W-BYOL013W-B 291 nt0.61□□□□□ -2.31
RPA43P46669 YOL160WYOL160W 342 nt0.61□□□□□ -2.31
RPA43P46669 YOR032W-AYOR032W-A 201 nt0.61□□□□□ -2.31
RPA43P46669 YPL229WYPL229W 621 nt0.61□□□□□ -2.31
RPA43P46669 snR41snR41 95 nt0.61□□□□□ -2.31
RPA43P46669 SWF1YDR126W 1011 nt0.6□□□□□ -2.31
RPA43P46669 YKL083WYKL083W 615 nt0.6□□□□□ -2.31
RPA43P46669 RKR1YMR247C 4689 nt0.6□□□□□ -2.31
RPA43P46669 snR189snR189 189 nt0.6□□□□□ -2.31
RPA43P46669 YMR160WYMR160W 2451 nt0.59□□□□□ -2.31
RPA43P46669 YAR047CYAR047C 321 nt0.59□□□□□ -2.31
RPA43P46669 TOM22YNL131W 459 nt0.59□□□□□ -2.31
RPA43P46669 YNL303WYNL303W 348 nt0.59□□□□□ -2.31
RPA43P46669 SDH7YDR511W 402 nt0.58□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 43.3 ms