Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GRIA1P42261 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GRIA1P42261 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.4■□□□□ 0.86
GRIA1P42261 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GRIA1P42261 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GRIA1P42261 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GRIA1P42261 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GRIA1P42261 AC004911.1-201ENST00000416316 871 ntBASIC20.4■□□□□ 0.86
GRIA1P42261 PGM5P4-201ENST00000421970 445 ntBASIC20.4■□□□□ 0.86
GRIA1P42261 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.4■□□□□ 0.86
GRIA1P42261 CYP2T1P-201ENST00000432607 1285 ntBASIC20.4■□□□□ 0.86
GRIA1P42261 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GRIA1P42261 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
GRIA1P42261 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GRIA1P42261 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GRIA1P42261 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.4■□□□□ 0.86
GRIA1P42261 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.4■□□□□ 0.86
GRIA1P42261 AC092437.1-201ENST00000624794 1048 ntBASIC20.4■□□□□ 0.86
GRIA1P42261 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.4■□□□□ 0.86
GRIA1P42261 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GRIA1P42261 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.4■□□□□ 0.86
GRIA1P42261 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GRIA1P42261 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GRIA1P42261 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.39■□□□□ 0.86
GRIA1P42261 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GRIA1P42261 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GRIA1P42261 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
GRIA1P42261 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GRIA1P42261 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
GRIA1P42261 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.39■□□□□ 0.85
GRIA1P42261 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GRIA1P42261 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
GRIA1P42261 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
GRIA1P42261 MCRIP2P1-201ENST00000394346 511 ntBASIC20.39■□□□□ 0.85
GRIA1P42261 AL355472.2-201ENST00000422958 438 ntBASIC20.39■□□□□ 0.85
GRIA1P42261 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.39■□□□□ 0.85
GRIA1P42261 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.39■□□□□ 0.85
GRIA1P42261 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.39■□□□□ 0.85
GRIA1P42261 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.39■□□□□ 0.85
GRIA1P42261 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.39■□□□□ 0.85
GRIA1P42261 AL158211.5-201ENST00000623583 2518 ntBASIC20.39■□□□□ 0.85
GRIA1P42261 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GRIA1P42261 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.39■□□□□ 0.85
GRIA1P42261 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.39■□□□□ 0.85
GRIA1P42261 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
GRIA1P42261 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.39■□□□□ 0.85
GRIA1P42261 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GRIA1P42261 PTBP1P-201ENST00000554374 1601 ntBASIC20.38■□□□□ 0.85
GRIA1P42261 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GRIA1P42261 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
GRIA1P42261 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GRIA1P42261 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
GRIA1P42261 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GRIA1P42261 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.38■□□□□ 0.85
GRIA1P42261 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.38■□□□□ 0.85
GRIA1P42261 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GRIA1P42261 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GRIA1P42261 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GRIA1P42261 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GRIA1P42261 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.38■□□□□ 0.85
GRIA1P42261 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.38■□□□□ 0.85
GRIA1P42261 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.38■□□□□ 0.85
GRIA1P42261 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.38■□□□□ 0.85
GRIA1P42261 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GRIA1P42261 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
GRIA1P42261 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GRIA1P42261 IKBKGP1-201ENST00000612193 1073 ntBASIC20.38■□□□□ 0.85
GRIA1P42261 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.38■□□□□ 0.85
GRIA1P42261 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GRIA1P42261 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GRIA1P42261 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.38■□□□□ 0.85
GRIA1P42261 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GRIA1P42261 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.37■□□□□ 0.85
GRIA1P42261 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GRIA1P42261 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
GRIA1P42261 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.37■□□□□ 0.85
GRIA1P42261 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GRIA1P42261 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.37■□□□□ 0.85
GRIA1P42261 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GRIA1P42261 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GRIA1P42261 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
GRIA1P42261 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.37■□□□□ 0.85
GRIA1P42261 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.37■□□□□ 0.85
GRIA1P42261 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GRIA1P42261 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
GRIA1P42261 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GRIA1P42261 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
GRIA1P42261 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GRIA1P42261 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.37■□□□□ 0.85
GRIA1P42261 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GRIA1P42261 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GRIA1P42261 AC100791.3-201ENST00000617619 330 ntBASIC20.37■□□□□ 0.85
GRIA1P42261 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GRIA1P42261 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.37■□□□□ 0.85
GRIA1P42261 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GRIA1P42261 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GRIA1P42261 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.37■□□□□ 0.85
GRIA1P42261 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.37■□□□□ 0.85
GRIA1P42261 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
GRIA1P42261 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms