Protein–RNA interactions for Protein: P40215

NDE1, External NADH-ubiquinone oxidoreductase 1, mitochondrial, yeastyeast

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDE1P40215 YPR063CYPR063C 423 nt1.46□□□□□ -2.18
NDE1P40215 RPL26AYLR344W 384 nt1.45□□□□□ -2.18
NDE1P40215 HCH1YNL281W 462 nt1.45□□□□□ -2.18
NDE1P40215 RPB10YOR210W 213 nt1.45□□□□□ -2.18
NDE1P40215 NPC2YDL046W 522 nt1.44□□□□□ -2.18
NDE1P40215 YER079WYER079W 633 nt1.44□□□□□ -2.18
NDE1P40215 PFD1YJL179W 330 nt1.44□□□□□ -2.18
NDE1P40215 BSC3YLR465C 309 nt1.44□□□□□ -2.18
NDE1P40215 CDC31YOR257W 486 nt1.44□□□□□ -2.18
NDE1P40215 SLI15YBR156C 2097 nt1.43□□□□□ -2.18
NDE1P40215 PET127YOR017W 2403 nt1.43□□□□□ -2.18
NDE1P40215 CCH1YGR217W 6120 nt1.43□□□□□ -2.18
NDE1P40215 tQ(UUG)E2tQ(UUG)E2 72 nt1.43□□□□□ -2.18
NDE1P40215 RRT1YBL048W 312 nt1.43□□□□□ -2.18
NDE1P40215 YBR012CYBR012C 420 nt1.43□□□□□ -2.18
NDE1P40215 YBR285WYBR285W 435 nt1.43□□□□□ -2.18
NDE1P40215 snR51snR51 107 nt1.43□□□□□ -2.18
NDE1P40215 SWF1YDR126W 1011 nt1.42□□□□□ -2.18
NDE1P40215 YLL020CYLL020C 306 nt1.42□□□□□ -2.18
NDE1P40215 YOL160WYOL160W 342 nt1.42□□□□□ -2.18
NDE1P40215 HKR1YDR420W 5409 nt1.42□□□□□ -2.18
NDE1P40215 MMS4YBR098W 2076 nt1.42□□□□□ -2.18
NDE1P40215 MAD1YGL086W 2250 nt1.42□□□□□ -2.18
NDE1P40215 VAR1Q0140 1197 nt1.41□□□□□ -2.18
NDE1P40215 YLR154W-FYLR154W-F 141 nt1.41□□□□□ -2.18
NDE1P40215 RPL38YLR325C 237 nt1.41□□□□□ -2.18
NDE1P40215 INP2YMR163C 2118 nt1.41□□□□□ -2.18
NDE1P40215 FYV8YGR196C 2454 nt1.41□□□□□ -2.18
NDE1P40215 MSH3YCR092C 3057 nt1.41□□□□□ -2.18
NDE1P40215 CDC25YLR310C 4770 nt1.4□□□□□ -2.18
NDE1P40215 YIR044CYIR044C 186 nt1.4□□□□□ -2.19
NDE1P40215 LCD1YDR499W 2244 nt1.39□□□□□ -2.19
NDE1P40215 YHR138CYHR138C 345 nt1.39□□□□□ -2.19
NDE1P40215 YJL135WYJL135W 318 nt1.39□□□□□ -2.19
NDE1P40215 APL3YBL037W 3078 nt1.38□□□□□ -2.19
NDE1P40215 YHL041WYHL041W 450 nt1.38□□□□□ -2.19
NDE1P40215 YIL020C-AYIL020C-A 339 nt1.38□□□□□ -2.19
NDE1P40215 YOR199WYOR199W 330 nt1.38□□□□□ -2.19
NDE1P40215 YJR003CYJR003C 1560 nt1.38□□□□□ -2.19
NDE1P40215 RAD9YDR217C 3930 nt1.37□□□□□ -2.19
NDE1P40215 ATG31YDR022C 591 nt1.37□□□□□ -2.19
NDE1P40215 YMR141W-AYMR141W-A 225 nt1.37□□□□□ -2.19
NDE1P40215 PAN2YGL094C 3348 nt1.37□□□□□ -2.19
NDE1P40215 NUP188YML103C 4968 nt1.37□□□□□ -2.19
NDE1P40215 NST1YNL091W 3723 nt1.36□□□□□ -2.19
NDE1P40215 TRM732YMR259C 4263 nt1.36□□□□□ -2.19
NDE1P40215 snR14snR14 160 nt1.36□□□□□ -2.19
NDE1P40215 RIM20YOR275C 1986 nt1.36□□□□□ -2.19
NDE1P40215 PMD1YER132C 5262 nt1.35□□□□□ -2.19
NDE1P40215 YML007C-AYML007C-A 111 nt1.35□□□□□ -2.19
NDE1P40215 LEE1YPL054W 906 nt1.35□□□□□ -2.19
NDE1P40215 PDE2YOR360C 1581 nt1.34□□□□□ -2.19
NDE1P40215 YAL068W-AYAL068W-A 255 nt1.34□□□□□ -2.19
NDE1P40215 YOR121CYOR121C 306 nt1.34□□□□□ -2.19
NDE1P40215 RAD34YDR314C 2079 nt1.34□□□□□ -2.19
NDE1P40215 COG4YPR105C 2586 nt1.34□□□□□ -2.2
NDE1P40215 IFH1YLR223C 3258 nt1.34□□□□□ -2.2
NDE1P40215 EAF1YDR359C 2949 nt1.33□□□□□ -2.2
NDE1P40215 SPC98YNL126W 2541 nt1.33□□□□□ -2.2
NDE1P40215 SET3YKR029C 2256 nt1.32□□□□□ -2.2
NDE1P40215 LAA1YJL207C 6045 nt1.32□□□□□ -2.2
NDE1P40215 YBR200W-AYBR200W-A 165 nt1.32□□□□□ -2.2
NDE1P40215 CUL3YGR003W 2235 nt1.32□□□□□ -2.2
NDE1P40215 FIG4YNL325C 2640 nt1.31□□□□□ -2.2
NDE1P40215 snR72snR72 98 nt1.31□□□□□ -2.2
NDE1P40215 GPG1YGL121C 381 nt1.31□□□□□ -2.2
NDE1P40215 YAL063C-AYAL063C-A 291 nt1.31□□□□□ -2.2
NDE1P40215 YOR072W-AYOR072W-A 249 nt1.31□□□□□ -2.2
NDE1P40215 AHC1YOR023C 1701 nt1.31□□□□□ -2.2
NDE1P40215 PAC1YOR269W 1485 nt1.31□□□□□ -2.2
NDE1P40215 NUP157YER105C 4176 nt1.3□□□□□ -2.2
NDE1P40215 CDC36YDL165W 576 nt1.3□□□□□ -2.2
NDE1P40215 YDR157WYDR157W 402 nt1.3□□□□□ -2.2
NDE1P40215 RPS20YHL015W 366 nt1.3□□□□□ -2.2
NDE1P40215 PCC1YKR095W-A 267 nt1.3□□□□□ -2.2
NDE1P40215 IRC23YOR044W 474 nt1.3□□□□□ -2.2
NDE1P40215 YPR002C-AYPR002C-A 198 nt1.3□□□□□ -2.2
NDE1P40215 YBR221W-AYBR221W-A 105 nt1.3□□□□□ -2.2
NDE1P40215 STB6YKL072W 2301 nt1.3□□□□□ -2.2
NDE1P40215 YLR419WYLR419W 4308 nt1.28□□□□□ -2.2
NDE1P40215 NIP100YPL174C 2607 nt1.28□□□□□ -2.2
NDE1P40215 tH(GUG)E1tH(GUG)E1 72 nt1.28□□□□□ -2.2
NDE1P40215 tH(GUG)E2tH(GUG)E2 72 nt1.28□□□□□ -2.2
NDE1P40215 tH(GUG)G1tH(GUG)G1 72 nt1.28□□□□□ -2.2
NDE1P40215 tH(GUG)G2tH(GUG)G2 72 nt1.28□□□□□ -2.2
NDE1P40215 tH(GUG)HtH(GUG)H 72 nt1.28□□□□□ -2.2
NDE1P40215 tH(GUG)KtH(GUG)K 72 nt1.28□□□□□ -2.2
NDE1P40215 tH(GUG)MtH(GUG)M 72 nt1.28□□□□□ -2.2
NDE1P40215 PKH2YOL100W 3246 nt1.28□□□□□ -2.21
NDE1P40215 STO1YMR125W 2586 nt1.27□□□□□ -2.21
NDE1P40215 PTP2YOR208W 2253 nt1.27□□□□□ -2.21
NDE1P40215 PBY1YBR094W 2262 nt1.27□□□□□ -2.21
NDE1P40215 YER137W-AYER137W-A 306 nt1.26□□□□□ -2.21
NDE1P40215 YDL206WYDL206W 2289 nt1.26□□□□□ -2.21
NDE1P40215 BUD3YCL014W 4911 nt1.25□□□□□ -2.21
NDE1P40215 YFL019CYFL019C 354 nt1.25□□□□□ -2.21
NDE1P40215 YNL284C-BYNL284C-B 5268 nt1.24□□□□□ -2.21
NDE1P40215 MAM33YIL070C 801 nt1.24□□□□□ -2.21
NDE1P40215 YDR426CYDR426C 378 nt1.23□□□□□ -2.21
NDE1P40215 YAR009CYAR009C 3591 nt1.22□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 44.1 ms