Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 SLD3YGL113W 2007 nt0.86□□□□□ -2.27
SSH1P38353 YGR290WYGR290W 444 nt0.86□□□□□ -2.27
SSH1P38353 KAP120YPL125W 3099 nt0.85□□□□□ -2.27
SSH1P38353 SLY1YDR189W 2001 nt0.85□□□□□ -2.27
SSH1P38353 CYC7YEL039C 342 nt0.85□□□□□ -2.27
SSH1P38353 YIL059CYIL059C 366 nt0.85□□□□□ -2.27
SSH1P38353 YMR141W-AYMR141W-A 225 nt0.85□□□□□ -2.27
SSH1P38353 ZEO1YOL109W 342 nt0.85□□□□□ -2.27
SSH1P38353 SMC1YFL008W 3678 nt0.85□□□□□ -2.27
SSH1P38353 UBC7YMR022W 498 nt0.84□□□□□ -2.27
SSH1P38353 ERP4YOR016C 624 nt0.84□□□□□ -2.27
SSH1P38353 IRC23YOR044W 474 nt0.84□□□□□ -2.27
SSH1P38353 YBL071CYBL071C 309 nt0.83□□□□□ -2.28
SSH1P38353 YOL013W-BYOL013W-B 291 nt0.83□□□□□ -2.28
SSH1P38353 YDL011CYDL011C 324 nt0.82□□□□□ -2.28
SSH1P38353 YLR171WYLR171W 390 nt0.82□□□□□ -2.28
SSH1P38353 RRT1YBL048W 312 nt0.82□□□□□ -2.28
SSH1P38353 YNL303WYNL303W 348 nt0.82□□□□□ -2.28
SSH1P38353 YOR199WYOR199W 330 nt0.82□□□□□ -2.28
SSH1P38353 SAS3YBL052C 2496 nt0.81□□□□□ -2.28
SSH1P38353 LCD1YDR499W 2244 nt0.81□□□□□ -2.28
SSH1P38353 TIM13YGR181W 318 nt0.81□□□□□ -2.28
SSH1P38353 YMR242W-AYMR242W-A 90 nt0.81□□□□□ -2.28
SSH1P38353 snR54snR54 86 nt0.81□□□□□ -2.28
SSH1P38353 STO1YMR125W 2586 nt0.81□□□□□ -2.28
SSH1P38353 STF2YGR008C 255 nt0.8□□□□□ -2.28
SSH1P38353 HUG1YML058W-A 207 nt0.8□□□□□ -2.28
SSH1P38353 YJR003CYJR003C 1560 nt0.79□□□□□ -2.28
SSH1P38353 NPC2YDL046W 522 nt0.79□□□□□ -2.28
SSH1P38353 YJL020W-AYJL020W-A 258 nt0.79□□□□□ -2.28
SSH1P38353 YKL202WYKL202W 582 nt0.79□□□□□ -2.28
SSH1P38353 YLR287CYLR287C 1068 nt0.79□□□□□ -2.28
SSH1P38353 ATP19YOL077W-A 207 nt0.79□□□□□ -2.28
SSH1P38353 LOA1YPR139C 903 nt0.79□□□□□ -2.28
SSH1P38353 PAU24YBR301W 363 nt0.79□□□□□ -2.28
SSH1P38353 PDE2YOR360C 1581 nt0.79□□□□□ -2.28
SSH1P38353 EFR3YMR212C 2349 nt0.78□□□□□ -2.28
SSH1P38353 AIM9YER080W 1884 nt0.78□□□□□ -2.28
SSH1P38353 FIG4YNL325C 2640 nt0.78□□□□□ -2.28
SSH1P38353 SLI15YBR156C 2097 nt0.78□□□□□ -2.28
SSH1P38353 RPS27AYKL156W 249 nt0.78□□□□□ -2.28
SSH1P38353 YLR101CYLR101C 396 nt0.78□□□□□ -2.28
SSH1P38353 TOM22YNL131W 459 nt0.78□□□□□ -2.28
SSH1P38353 YBR200W-AYBR200W-A 165 nt0.78□□□□□ -2.28
SSH1P38353 AIM44YPL158C 2277 nt0.77□□□□□ -2.29
SSH1P38353 CBS1YDL069C 690 nt0.77□□□□□ -2.29
SSH1P38353 YJL135WYJL135W 318 nt0.77□□□□□ -2.29
SSH1P38353 YOR029WYOR029W 336 nt0.77□□□□□ -2.29
SSH1P38353 DIE2YGR227W 1578 nt0.77□□□□□ -2.29
SSH1P38353 ZIP2YGL249W 2115 nt0.77□□□□□ -2.29
SSH1P38353 MMS4YBR098W 2076 nt0.76□□□□□ -2.29
SSH1P38353 PAC1YOR269W 1485 nt0.76□□□□□ -2.29
SSH1P38353 YDL196WYDL196W 330 nt0.76□□□□□ -2.29
SSH1P38353 YGR042WYGR042W 816 nt0.76□□□□□ -2.29
SSH1P38353 ECL1YGR146C 636 nt0.76□□□□□ -2.29
SSH1P38353 COG4YPR105C 2586 nt0.76□□□□□ -2.29
SSH1P38353 BUD3YCL014W 4911 nt0.76□□□□□ -2.29
SSH1P38353 PAN2YGL094C 3348 nt0.76□□□□□ -2.29
SSH1P38353 YPR117WYPR117W 7470 nt0.75□□□□□ -2.29
SSH1P38353 MRPL50YNR022C 420 nt0.75□□□□□ -2.29
SSH1P38353 YOL160WYOL160W 342 nt0.75□□□□□ -2.29
SSH1P38353 YDL206WYDL206W 2289 nt0.75□□□□□ -2.29
SSH1P38353 YHL042WYHL042W 453 nt0.74□□□□□ -2.29
SSH1P38353 PAM16YJL104W 450 nt0.74□□□□□ -2.29
SSH1P38353 YPL261CYPL261C 309 nt0.74□□□□□ -2.29
SSH1P38353 snR41snR41 95 nt0.74□□□□□ -2.29
SSH1P38353 snR72snR72 98 nt0.73□□□□□ -2.29
SSH1P38353 YAR009CYAR009C 3591 nt0.73□□□□□ -2.29
SSH1P38353 YAP6YDR259C 1152 nt0.72□□□□□ -2.29
SSH1P38353 YOR108C-AYOR108C-A 210 nt0.72□□□□□ -2.29
SSH1P38353 RAD34YDR314C 2079 nt0.71□□□□□ -2.3
SSH1P38353 YER006C-AYER006C-A 318 nt0.71□□□□□ -2.3
SSH1P38353 RPB10YOR210W 213 nt0.71□□□□□ -2.3
SSH1P38353 snR51snR51 107 nt0.71□□□□□ -2.3
SSH1P38353 RKR1YMR247C 4689 nt0.7□□□□□ -2.3
SSH1P38353 SWF1YDR126W 1011 nt0.7□□□□□ -2.3
SSH1P38353 SDH7YDR511W 402 nt0.7□□□□□ -2.3
SSH1P38353 YMR290W-AYMR290W-A 348 nt0.7□□□□□ -2.3
SSH1P38353 YPL229WYPL229W 621 nt0.7□□□□□ -2.3
SSH1P38353 NIP100YPL174C 2607 nt0.69□□□□□ -2.3
SSH1P38353 WAR1YML076C 2835 nt0.69□□□□□ -2.3
SSH1P38353 RPL26AYLR344W 384 nt0.69□□□□□ -2.3
SSH1P38353 SEC1YDR164C 2175 nt0.68□□□□□ -2.3
SSH1P38353 YHL041WYHL041W 450 nt0.68□□□□□ -2.3
SSH1P38353 GPG1YGL121C 381 nt0.67□□□□□ -2.3
SSH1P38353 YBL008W-AYBL008W-A 240 nt0.67□□□□□ -2.3
SSH1P38353 ISF1YMR081C 1017 nt0.67□□□□□ -2.3
SSH1P38353 UBP3YER151C 2739 nt0.67□□□□□ -2.3
SSH1P38353 RIM20YOR275C 1986 nt0.66□□□□□ -2.3
SSH1P38353 GEA2YEL022W 4380 nt0.66□□□□□ -2.3
SSH1P38353 ATG31YDR022C 591 nt0.66□□□□□ -2.3
SSH1P38353 ALG13YGL047W 609 nt0.66□□□□□ -2.3
SSH1P38353 RPS20YHL015W 366 nt0.66□□□□□ -2.3
SSH1P38353 RPS24BYIL069C 408 nt0.66□□□□□ -2.3
SSH1P38353 YMR031W-AYMR031W-A 327 nt0.66□□□□□ -2.3
SSH1P38353 INP2YMR163C 2118 nt0.65□□□□□ -2.3
SSH1P38353 YKL083WYKL083W 615 nt0.65□□□□□ -2.31
SSH1P38353 YPR159C-AYPR159C-A 102 nt0.65□□□□□ -2.31
SSH1P38353 NHP2YDL208W 471 nt0.64□□□□□ -2.31
SSH1P38353 ISD11YER048W-A 285 nt0.64□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 61.7 ms