Protein–RNA interactions for Protein: P29056

BRF1, Transcription factor IIIB 70 kDa subunit, yeastyeast

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRF1P29056 UPS1YLR193C 528 nt1.43□□□□□ -2.18
BRF1P29056 YOR376WYOR376W 369 nt1.43□□□□□ -2.18
BRF1P29056 MVP1YMR004W 1536 nt1.43□□□□□ -2.18
BRF1P29056 MDS3YGL197W 4464 nt1.43□□□□□ -2.18
BRF1P29056 AHC1YOR023C 1701 nt1.43□□□□□ -2.18
BRF1P29056 YHL041WYHL041W 450 nt1.42□□□□□ -2.18
BRF1P29056 RAD9YDR217C 3930 nt1.42□□□□□ -2.18
BRF1P29056 YGL217CYGL217C 342 nt1.41□□□□□ -2.18
BRF1P29056 TIM18YOR297C 579 nt1.41□□□□□ -2.18
BRF1P29056 SMC4YLR086W 4257 nt1.41□□□□□ -2.18
BRF1P29056 SAS3YBL052C 2496 nt1.41□□□□□ -2.18
BRF1P29056 SGO1YOR073W 1773 nt1.4□□□□□ -2.19
BRF1P29056 RAD50YNL250W 3939 nt1.4□□□□□ -2.19
BRF1P29056 YIL020C-AYIL020C-A 339 nt1.4□□□□□ -2.19
BRF1P29056 YOR161W-BYOR161W-B 261 nt1.4□□□□□ -2.19
BRF1P29056 YNL284C-BYNL284C-B 5268 nt1.4□□□□□ -2.19
BRF1P29056 SEC3YER008C 4011 nt1.39□□□□□ -2.19
BRF1P29056 YMR175W-AYMR175W-A 195 nt1.39□□□□□ -2.19
BRF1P29056 snR51snR51 107 nt1.39□□□□□ -2.19
BRF1P29056 NOC3YLR002C 1992 nt1.39□□□□□ -2.19
BRF1P29056 VPS54YDR027C 2670 nt1.38□□□□□ -2.19
BRF1P29056 SLX4YLR135W 2247 nt1.38□□□□□ -2.19
BRF1P29056 YNL058CYNL058C 951 nt1.38□□□□□ -2.19
BRF1P29056 YPR012WYPR012W 255 nt1.38□□□□□ -2.19
BRF1P29056 YPR063CYPR063C 423 nt1.38□□□□□ -2.19
BRF1P29056 SEC5YDR166C 2916 nt1.38□□□□□ -2.19
BRF1P29056 NST1YNL091W 3723 nt1.38□□□□□ -2.19
BRF1P29056 PAC1YOR269W 1485 nt1.37□□□□□ -2.19
BRF1P29056 AI5_ALPHAQ0070 1893 nt1.37□□□□□ -2.19
BRF1P29056 YMR242W-AYMR242W-A 90 nt1.37□□□□□ -2.19
BRF1P29056 RPB10YOR210W 213 nt1.37□□□□□ -2.19
BRF1P29056 YSY6YBR162W-A 198 nt1.37□□□□□ -2.19
BRF1P29056 YJR003CYJR003C 1560 nt1.37□□□□□ -2.19
BRF1P29056 SDH2YLL041C 801 nt1.36□□□□□ -2.19
BRF1P29056 IRC23YOR044W 474 nt1.36□□□□□ -2.19
BRF1P29056 YOR072W-AYOR072W-A 249 nt1.36□□□□□ -2.19
BRF1P29056 MAD1YGL086W 2250 nt1.35□□□□□ -2.19
BRF1P29056 ATG31YDR022C 591 nt1.35□□□□□ -2.19
BRF1P29056 RPL38YLR325C 237 nt1.35□□□□□ -2.19
BRF1P29056 YOL160WYOL160W 342 nt1.35□□□□□ -2.19
BRF1P29056 YOR108C-AYOR108C-A 210 nt1.35□□□□□ -2.19
BRF1P29056 YOR199WYOR199W 330 nt1.35□□□□□ -2.19
BRF1P29056 YPL261CYPL261C 309 nt1.35□□□□□ -2.19
BRF1P29056 YPR170W-AYPR170W-A 186 nt1.35□□□□□ -2.19
BRF1P29056 LAA1YJL207C 6045 nt1.35□□□□□ -2.19
BRF1P29056 ZIP2YGL249W 2115 nt1.34□□□□□ -2.19
BRF1P29056 NUP145YGL092W 3954 nt1.34□□□□□ -2.19
BRF1P29056 tH(GUG)E1tH(GUG)E1 72 nt1.34□□□□□ -2.19
BRF1P29056 tH(GUG)E2tH(GUG)E2 72 nt1.34□□□□□ -2.19
BRF1P29056 tH(GUG)G1tH(GUG)G1 72 nt1.34□□□□□ -2.19
BRF1P29056 tH(GUG)G2tH(GUG)G2 72 nt1.34□□□□□ -2.19
BRF1P29056 tH(GUG)HtH(GUG)H 72 nt1.34□□□□□ -2.19
BRF1P29056 tH(GUG)KtH(GUG)K 72 nt1.34□□□□□ -2.19
BRF1P29056 tH(GUG)MtH(GUG)M 72 nt1.34□□□□□ -2.19
BRF1P29056 YOR029WYOR029W 336 nt1.34□□□□□ -2.19
BRF1P29056 SPC98YNL126W 2541 nt1.34□□□□□ -2.2
BRF1P29056 INP2YMR163C 2118 nt1.34□□□□□ -2.2
BRF1P29056 SCW11YGL028C 1629 nt1.33□□□□□ -2.2
BRF1P29056 ALY2YJL084C 3141 nt1.33□□□□□ -2.2
BRF1P29056 SWI4YER111C 3282 nt1.32□□□□□ -2.2
BRF1P29056 YLL054CYLL054C 2532 nt1.32□□□□□ -2.2
BRF1P29056 snR72snR72 98 nt1.32□□□□□ -2.2
BRF1P29056 NPC2YDL046W 522 nt1.32□□□□□ -2.2
BRF1P29056 YDL211CYDL211C 1119 nt1.32□□□□□ -2.2
BRF1P29056 YGR035CYGR035C 351 nt1.32□□□□□ -2.2
BRF1P29056 RPS20YHL015W 366 nt1.31□□□□□ -2.2
BRF1P29056 tV(UAC)BtV(UAC)B 74 nt1.31□□□□□ -2.2
BRF1P29056 tV(UAC)DtV(UAC)D 74 nt1.31□□□□□ -2.2
BRF1P29056 YJL135WYJL135W 318 nt1.31□□□□□ -2.2
BRF1P29056 YAL063C-AYAL063C-A 291 nt1.31□□□□□ -2.2
BRF1P29056 YAR053WYAR053W 297 nt1.31□□□□□ -2.2
BRF1P29056 YML007C-AYML007C-A 111 nt1.31□□□□□ -2.2
BRF1P29056 snR14snR14 160 nt1.31□□□□□ -2.2
BRF1P29056 NUP188YML103C 4968 nt1.3□□□□□ -2.2
BRF1P29056 COG4YPR105C 2586 nt1.3□□□□□ -2.2
BRF1P29056 ROM2YLR371W 4071 nt1.3□□□□□ -2.2
BRF1P29056 CDC25YLR310C 4770 nt1.3□□□□□ -2.2
BRF1P29056 NIP100YPL174C 2607 nt1.3□□□□□ -2.2
BRF1P29056 SPT21YMR179W 2277 nt1.29□□□□□ -2.2
BRF1P29056 RIM20YOR275C 1986 nt1.29□□□□□ -2.2
BRF1P29056 YDR169C-AYDR169C-A 150 nt1.29□□□□□ -2.2
BRF1P29056 YLR334CYLR334C 381 nt1.29□□□□□ -2.2
BRF1P29056 YMR290W-AYMR290W-A 348 nt1.29□□□□□ -2.2
BRF1P29056 YPR002C-AYPR002C-A 198 nt1.29□□□□□ -2.2
BRF1P29056 IML1YJR138W 4755 nt1.29□□□□□ -2.2
BRF1P29056 SLI15YBR156C 2097 nt1.28□□□□□ -2.2
BRF1P29056 TTI1YKL033W 3117 nt1.28□□□□□ -2.2
BRF1P29056 MPT5YGL178W 2580 nt1.27□□□□□ -2.21
BRF1P29056 RAD34YDR314C 2079 nt1.27□□□□□ -2.21
BRF1P29056 PAU12YGR294W 363 nt1.27□□□□□ -2.21
BRF1P29056 PAU24YBR301W 363 nt1.27□□□□□ -2.21
BRF1P29056 APL3YBL037W 3078 nt1.27□□□□□ -2.21
BRF1P29056 LCD1YDR499W 2244 nt1.26□□□□□ -2.21
BRF1P29056 CSN9YDR179C 489 nt1.26□□□□□ -2.21
BRF1P29056 YLL020CYLL020C 306 nt1.26□□□□□ -2.21
BRF1P29056 HMRA1YCR097W 381 nt1.25□□□□□ -2.21
BRF1P29056 YDR426CYDR426C 378 nt1.25□□□□□ -2.21
BRF1P29056 PCC1YKR095W-A 267 nt1.25□□□□□ -2.21
BRF1P29056 BIL1YOR304C-A 231 nt1.25□□□□□ -2.21
BRF1P29056 APL1YJR005W 2103 nt1.25□□□□□ -2.21
Retrieved 100 of 7,029 protein–RNA pairs in 47.3 ms