Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 AL020996.1-203ENST00000536896 2307 ntBASIC19.23■□□□□ 0.67
HTR1EP28566 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.23■□□□□ 0.67
HTR1EP28566 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HTR1EP28566 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.23■□□□□ 0.67
HTR1EP28566 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HTR1EP28566 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.23■□□□□ 0.67
HTR1EP28566 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HTR1EP28566 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.23■□□□□ 0.67
HTR1EP28566 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HTR1EP28566 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HTR1EP28566 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HTR1EP28566 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HTR1EP28566 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HTR1EP28566 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.23■□□□□ 0.67
HTR1EP28566 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HTR1EP28566 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
HTR1EP28566 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HTR1EP28566 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HTR1EP28566 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.23■□□□□ 0.67
HTR1EP28566 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
HTR1EP28566 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HTR1EP28566 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
HTR1EP28566 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HTR1EP28566 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HTR1EP28566 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HTR1EP28566 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HTR1EP28566 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HTR1EP28566 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HTR1EP28566 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.22■□□□□ 0.67
HTR1EP28566 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.22■□□□□ 0.67
HTR1EP28566 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HTR1EP28566 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.22■□□□□ 0.67
HTR1EP28566 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.22■□□□□ 0.67
HTR1EP28566 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HTR1EP28566 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.22■□□□□ 0.67
HTR1EP28566 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.22■□□□□ 0.67
HTR1EP28566 MFSD11-216ENST00000590393 1141 ntBASIC19.22■□□□□ 0.67
HTR1EP28566 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HTR1EP28566 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HTR1EP28566 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HTR1EP28566 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.21■□□□□ 0.67
HTR1EP28566 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HTR1EP28566 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HTR1EP28566 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HTR1EP28566 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HTR1EP28566 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HTR1EP28566 TSPY6P-201ENST00000448518 926 ntBASIC19.21■□□□□ 0.67
HTR1EP28566 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.21■□□□□ 0.67
HTR1EP28566 MIR2861-201ENST00000636310 90 ntBASIC19.21■□□□□ 0.67
HTR1EP28566 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.21■□□□□ 0.67
HTR1EP28566 AL158211.5-201ENST00000623583 2518 ntBASIC19.21■□□□□ 0.67
HTR1EP28566 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HTR1EP28566 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HTR1EP28566 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.21■□□□□ 0.67
HTR1EP28566 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.21■□□□□ 0.67
HTR1EP28566 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HTR1EP28566 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.2■□□□□ 0.66
HTR1EP28566 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.2■□□□□ 0.66
HTR1EP28566 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HTR1EP28566 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.2■□□□□ 0.66
HTR1EP28566 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HTR1EP28566 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HTR1EP28566 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.2■□□□□ 0.66
HTR1EP28566 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HTR1EP28566 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.2■□□□□ 0.66
HTR1EP28566 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.2■□□□□ 0.66
HTR1EP28566 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.2■□□□□ 0.66
HTR1EP28566 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HTR1EP28566 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HTR1EP28566 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HTR1EP28566 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HTR1EP28566 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HTR1EP28566 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HTR1EP28566 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.2■□□□□ 0.66
HTR1EP28566 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HTR1EP28566 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HTR1EP28566 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HTR1EP28566 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HTR1EP28566 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HTR1EP28566 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HTR1EP28566 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HTR1EP28566 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HTR1EP28566 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HTR1EP28566 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HTR1EP28566 FAM201B-201ENST00000458407 597 ntBASIC19.19■□□□□ 0.66
HTR1EP28566 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.19■□□□□ 0.66
HTR1EP28566 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.19■□□□□ 0.66
HTR1EP28566 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.19■□□□□ 0.66
HTR1EP28566 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.19■□□□□ 0.66
HTR1EP28566 AL050303.2-201ENST00000619798 666 ntBASIC19.19■□□□□ 0.66
HTR1EP28566 AC231657.2-201ENST00000624556 255 ntBASIC19.19■□□□□ 0.66
HTR1EP28566 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HTR1EP28566 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HTR1EP28566 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HTR1EP28566 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HTR1EP28566 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HTR1EP28566 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HTR1EP28566 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
HTR1EP28566 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
HTR1EP28566 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms