Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
XPAP23025 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
XPAP23025 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
XPAP23025 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
XPAP23025 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.29■□□□□ 0.84
XPAP23025 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.29■□□□□ 0.84
XPAP23025 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XPAP23025 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
XPAP23025 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XPAP23025 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
XPAP23025 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.29■□□□□ 0.84
XPAP23025 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.29■□□□□ 0.84
XPAP23025 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XPAP23025 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
XPAP23025 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.29■□□□□ 0.84
XPAP23025 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
XPAP23025 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
XPAP23025 AL121603.2-201ENST00000557373 2117 ntBASIC20.29■□□□□ 0.84
XPAP23025 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XPAP23025 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
XPAP23025 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
XPAP23025 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
XPAP23025 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
XPAP23025 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
XPAP23025 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
XPAP23025 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
XPAP23025 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.28■□□□□ 0.84
XPAP23025 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.28■□□□□ 0.84
XPAP23025 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
XPAP23025 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
XPAP23025 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
XPAP23025 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.28■□□□□ 0.84
XPAP23025 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.28■□□□□ 0.84
XPAP23025 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
XPAP23025 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
XPAP23025 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
XPAP23025 AC006058.3-201ENST00000606217 1069 ntBASIC20.28■□□□□ 0.84
XPAP23025 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.28■□□□□ 0.84
XPAP23025 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XPAP23025 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
XPAP23025 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XPAP23025 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XPAP23025 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
XPAP23025 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
XPAP23025 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.28■□□□□ 0.84
XPAP23025 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
XPAP23025 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XPAP23025 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
XPAP23025 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.27■□□□□ 0.84
XPAP23025 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
XPAP23025 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
XPAP23025 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
XPAP23025 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
XPAP23025 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
XPAP23025 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.27■□□□□ 0.84
XPAP23025 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.27■□□□□ 0.84
XPAP23025 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.27■□□□□ 0.84
XPAP23025 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
XPAP23025 UNC93B4-201ENST00000505679 747 ntBASIC20.27■□□□□ 0.84
XPAP23025 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
XPAP23025 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
XPAP23025 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
XPAP23025 AL137060.1-201ENST00000618151 2648 ntBASIC20.27■□□□□ 0.84
XPAP23025 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
XPAP23025 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.27■□□□□ 0.83
XPAP23025 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.27■□□□□ 0.83
XPAP23025 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
XPAP23025 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
XPAP23025 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
XPAP23025 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
XPAP23025 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
XPAP23025 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
XPAP23025 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
XPAP23025 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
XPAP23025 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.26■□□□□ 0.83
XPAP23025 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.26■□□□□ 0.83
XPAP23025 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
XPAP23025 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
XPAP23025 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.26■□□□□ 0.83
XPAP23025 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.26■□□□□ 0.83
XPAP23025 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
XPAP23025 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
XPAP23025 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
XPAP23025 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
XPAP23025 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
XPAP23025 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
XPAP23025 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
XPAP23025 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
XPAP23025 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
XPAP23025 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.25■□□□□ 0.83
XPAP23025 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.25■□□□□ 0.83
XPAP23025 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
XPAP23025 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
XPAP23025 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
XPAP23025 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.25■□□□□ 0.83
XPAP23025 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.25■□□□□ 0.83
XPAP23025 KRT17P3-201ENST00000420566 1262 ntBASIC20.25■□□□□ 0.83
XPAP23025 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.25■□□□□ 0.83
XPAP23025 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.25■□□□□ 0.83
XPAP23025 AC005829.2-201ENST00000571422 1056 ntBASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms