Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.46■□□□□ 0.23
NF1P21359 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.46■□□□□ 0.23
NF1P21359 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
NF1P21359 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
NF1P21359 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.46■□□□□ 0.23
NF1P21359 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NF1P21359 C2orf69P3-201ENST00000565542 1120 ntBASIC16.46■□□□□ 0.23
NF1P21359 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.46■□□□□ 0.23
NF1P21359 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NF1P21359 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NF1P21359 KRT16P1-201ENST00000399124 1418 ntBASIC16.46■□□□□ 0.23
NF1P21359 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
NF1P21359 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NF1P21359 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
NF1P21359 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
NF1P21359 AC124283.5-201ENST00000624661 1809 ntBASIC16.46■□□□□ 0.22
NF1P21359 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
NF1P21359 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
NF1P21359 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.46■□□□□ 0.22
NF1P21359 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.46■□□□□ 0.22
NF1P21359 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.46■□□□□ 0.22
NF1P21359 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.46■□□□□ 0.22
NF1P21359 C1orf229-201ENST00000623686 2258 ntBASIC16.45■□□□□ 0.22
NF1P21359 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NF1P21359 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NF1P21359 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NF1P21359 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.45■□□□□ 0.22
NF1P21359 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.45■□□□□ 0.22
NF1P21359 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NF1P21359 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NF1P21359 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
NF1P21359 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NF1P21359 KRT18P13-201ENST00000400056 1290 ntBASIC16.45■□□□□ 0.22
NF1P21359 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.45■□□□□ 0.22
NF1P21359 AP002982.1-201ENST00000492365 877 ntBASIC16.45■□□□□ 0.22
NF1P21359 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.45■□□□□ 0.22
NF1P21359 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.45■□□□□ 0.22
NF1P21359 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NF1P21359 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NF1P21359 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NF1P21359 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NF1P21359 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NF1P21359 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NF1P21359 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NF1P21359 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NF1P21359 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NF1P21359 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NF1P21359 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.45■□□□□ 0.22
NF1P21359 FAAHP1-202ENST00000446499 1238 ntBASIC16.45■□□□□ 0.22
NF1P21359 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.45■□□□□ 0.22
NF1P21359 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.45■□□□□ 0.22
NF1P21359 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.45■□□□□ 0.22
NF1P21359 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
NF1P21359 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
NF1P21359 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
NF1P21359 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
NF1P21359 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NF1P21359 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.44■□□□□ 0.22
NF1P21359 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NF1P21359 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
NF1P21359 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NF1P21359 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NF1P21359 KSR1P1-201ENST00000446298 240 ntBASIC16.44■□□□□ 0.22
NF1P21359 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.44■□□□□ 0.22
NF1P21359 AC004264.1-201ENST00000608354 794 ntBASIC16.44■□□□□ 0.22
NF1P21359 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.44■□□□□ 0.22
NF1P21359 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NF1P21359 PGM5P4-201ENST00000421970 445 ntBASIC16.44■□□□□ 0.22
NF1P21359 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.44■□□□□ 0.22
NF1P21359 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.44■□□□□ 0.22
NF1P21359 AC111152.3-201ENST00000569699 673 ntBASIC16.44■□□□□ 0.22
NF1P21359 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NF1P21359 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
NF1P21359 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
NF1P21359 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
NF1P21359 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
NF1P21359 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NF1P21359 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.43■□□□□ 0.22
NF1P21359 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
NF1P21359 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.43■□□□□ 0.22
NF1P21359 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.43■□□□□ 0.22
NF1P21359 AL121829.2-201ENST00000620908 328 ntBASIC16.43■□□□□ 0.22
NF1P21359 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
NF1P21359 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NF1P21359 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
NF1P21359 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.43■□□□□ 0.22
NF1P21359 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NF1P21359 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NF1P21359 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NF1P21359 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NF1P21359 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.43■□□□□ 0.22
NF1P21359 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.43■□□□□ 0.22
NF1P21359 AL138966.2-201ENST00000621997 464 ntBASIC16.43■□□□□ 0.22
NF1P21359 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
NF1P21359 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NF1P21359 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NF1P21359 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NF1P21359 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NF1P21359 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.42■□□□□ 0.22
NF1P21359 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms