Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 YIL134C-AYIL134C-A 204 nt2.07□□□□□ -2.08
CDC43P18898 YMR242W-AYMR242W-A 90 nt2.07□□□□□ -2.08
CDC43P18898 TOP2YNL088W 4287 nt2.06□□□□□ -2.08
CDC43P18898 AMS1YGL156W 3252 nt2.06□□□□□ -2.08
CDC43P18898 YME2YMR302C 2553 nt2.06□□□□□ -2.08
CDC43P18898 AXL1YPR122W 3627 nt2.06□□□□□ -2.08
CDC43P18898 ILS1YBL076C 3219 nt2.05□□□□□ -2.08
CDC43P18898 YCL001W-BYCL001W-B 255 nt2.05□□□□□ -2.08
CDC43P18898 AHC1YOR023C 1701 nt2.05□□□□□ -2.08
CDC43P18898 VPS8YAL002W 3825 nt2.05□□□□□ -2.08
CDC43P18898 NOP14YDL148C 2433 nt2.05□□□□□ -2.08
CDC43P18898 MET18YIL128W 3099 nt2.04□□□□□ -2.08
CDC43P18898 YLR419WYLR419W 4308 nt2.04□□□□□ -2.08
CDC43P18898 IFH1YLR223C 3258 nt2.04□□□□□ -2.08
CDC43P18898 FIG4YNL325C 2640 nt2.04□□□□□ -2.08
CDC43P18898 ELG1YOR144C 2376 nt2.03□□□□□ -2.08
CDC43P18898 SAP185YJL098W 3177 nt2.03□□□□□ -2.08
CDC43P18898 NCA2YPR155C 1851 nt2.03□□□□□ -2.09
CDC43P18898 MMS22YLR320W 4365 nt2.03□□□□□ -2.09
CDC43P18898 APL2YKL135C 2181 nt2.02□□□□□ -2.09
CDC43P18898 PIG1YLR273C 1947 nt2.02□□□□□ -2.09
CDC43P18898 YPL044CYPL044C 549 nt2.02□□□□□ -2.09
CDC43P18898 RPO41YFL036W 4056 nt2.02□□□□□ -2.09
CDC43P18898 MAD1YGL086W 2250 nt2.02□□□□□ -2.09
CDC43P18898 ZIP2YGL249W 2115 nt2.02□□□□□ -2.09
CDC43P18898 RPL33AYPL143W 324 nt2.01□□□□□ -2.09
CDC43P18898 MSB2YGR014W 3921 nt2.01□□□□□ -2.09
CDC43P18898 YDR341CYDR341C 1824 nt2.01□□□□□ -2.09
CDC43P18898 YNL018CYNL018C 1839 nt2.01□□□□□ -2.09
CDC43P18898 YBR221W-AYBR221W-A 105 nt2□□□□□ -2.09
CDC43P18898 VTC3YPL019C 2508 nt2□□□□□ -2.09
CDC43P18898 CSF1YLR087C 8877 nt2□□□□□ -2.09
CDC43P18898 TOR1YJR066W 7413 nt1.99□□□□□ -2.09
CDC43P18898 MSH5YDL154W 2706 nt1.99□□□□□ -2.09
CDC43P18898 YDR544CYDR544C 429 nt1.99□□□□□ -2.09
CDC43P18898 YER053C-AYER053C-A 114 nt1.99□□□□□ -2.09
CDC43P18898 YHR032W-AYHR032W-A 180 nt1.99□□□□□ -2.09
CDC43P18898 CDC31YOR257W 486 nt1.99□□□□□ -2.09
CDC43P18898 TCB2YNL087W 3537 nt1.99□□□□□ -2.09
CDC43P18898 POL3YDL102W 3294 nt1.99□□□□□ -2.09
CDC43P18898 SLD3YGL113W 2007 nt1.98□□□□□ -2.09
CDC43P18898 MDS3YGL197W 4464 nt1.98□□□□□ -2.09
CDC43P18898 YDR521WYDR521W 336 nt1.98□□□□□ -2.09
CDC43P18898 YFR012W-AYFR012W-A 87 nt1.98□□□□□ -2.09
CDC43P18898 YJL022WYJL022W 309 nt1.98□□□□□ -2.09
CDC43P18898 YOR102WYOR102W 351 nt1.98□□□□□ -2.09
CDC43P18898 CHC1YGL206C 4962 nt1.98□□□□□ -2.09
CDC43P18898 AIM44YPL158C 2277 nt1.98□□□□□ -2.09
CDC43P18898 SPF1YEL031W 3648 nt1.97□□□□□ -2.09
CDC43P18898 YGR109W-BYGR109W-B 4644 nt1.97□□□□□ -2.09
CDC43P18898 YOR343W-BYOR343W-B 5313 nt1.97□□□□□ -2.09
CDC43P18898 KRE33YNL132W 3171 nt1.96□□□□□ -2.1
CDC43P18898 YCR102W-AYCR102W-A 198 nt1.96□□□□□ -2.1
CDC43P18898 YOR108C-AYOR108C-A 210 nt1.96□□□□□ -2.1
CDC43P18898 YBR206WYBR206W 324 nt1.96□□□□□ -2.1
CDC43P18898 PHO91YNR013C 2685 nt1.96□□□□□ -2.1
CDC43P18898 YDR354C-AYDR354C-A 144 nt1.95□□□□□ -2.1
CDC43P18898 tL(UAA)QtL(UAA)Q 85 nt1.95□□□□□ -2.1
CDC43P18898 YJL026C-AYJL026C-A 222 nt1.95□□□□□ -2.1
CDC43P18898 RPS17AYML024W 411 nt1.95□□□□□ -2.1
CDC43P18898 TRS130YMR218C 3309 nt1.95□□□□□ -2.1
CDC43P18898 PIP2YOR363C 2991 nt1.95□□□□□ -2.1
CDC43P18898 BCK1YJL095W 4437 nt1.94□□□□□ -2.1
CDC43P18898 ZIP1YDR285W 2628 nt1.94□□□□□ -2.1
CDC43P18898 FAR11YNL127W 2862 nt1.94□□□□□ -2.1
CDC43P18898 PAA1YDR071C 576 nt1.94□□□□□ -2.1
CDC43P18898 TFB5YDR079C-A 219 nt1.94□□□□□ -2.1
CDC43P18898 YHL015W-AYHL015W-A 84 nt1.94□□□□□ -2.1
CDC43P18898 RPS30BYOR182C 192 nt1.94□□□□□ -2.1
CDC43P18898 RAV1YJR033C 4074 nt1.94□□□□□ -2.1
CDC43P18898 STH1YIL126W 4080 nt1.94□□□□□ -2.1
CDC43P18898 COX12YLR038C 252 nt1.93□□□□□ -2.1
CDC43P18898 RPS29AYLR388W 171 nt1.93□□□□□ -2.1
CDC43P18898 YOR314W-AYOR314W-A 111 nt1.93□□□□□ -2.1
CDC43P18898 TOF1YNL273W 3717 nt1.93□□□□□ -2.1
CDC43P18898 SAS3YBL052C 2496 nt1.93□□□□□ -2.1
CDC43P18898 ARP8YOR141C 2646 nt1.92□□□□□ -2.1
CDC43P18898 ALK1YGL021W 2283 nt1.92□□□□□ -2.1
CDC43P18898 DGR2YKL121W 2559 nt1.92□□□□□ -2.1
CDC43P18898 YFR016CYFR016C 3702 nt1.91□□□□□ -2.1
CDC43P18898 GIP3YPL137C 3831 nt1.91□□□□□ -2.1
CDC43P18898 SKP2YNL311C 2292 nt1.91□□□□□ -2.1
CDC43P18898 tC(GCA)BtC(GCA)B 72 nt1.91□□□□□ -2.1
CDC43P18898 tC(GCA)GtC(GCA)G 72 nt1.91□□□□□ -2.1
CDC43P18898 tC(GCA)P1tC(GCA)P1 72 nt1.91□□□□□ -2.1
CDC43P18898 tC(GCA)P2tC(GCA)P2 72 nt1.91□□□□□ -2.1
CDC43P18898 tF(GAA)DtF(GAA)D 73 nt1.91□□□□□ -2.1
CDC43P18898 tF(GAA)NtF(GAA)N 73 nt1.91□□□□□ -2.1
CDC43P18898 HIR3YJR140C 4947 nt1.91□□□□□ -2.1
CDC43P18898 SVL3YPL032C 2478 nt1.91□□□□□ -2.1
CDC43P18898 BUB1YGR188C 3066 nt1.9□□□□□ -2.1
CDC43P18898 YNL103W-AYNL103W-A 90 nt1.9□□□□□ -2.11
CDC43P18898 RSE1YML049C 4086 nt1.9□□□□□ -2.11
CDC43P18898 DBP10YDL031W 2988 nt1.9□□□□□ -2.11
CDC43P18898 NUP100YKL068W 2880 nt1.9□□□□□ -2.11
CDC43P18898 CTF4YPR135W 2784 nt1.9□□□□□ -2.11
CDC43P18898 DNF1YER166W 4716 nt1.89□□□□□ -2.11
CDC43P18898 SEC16YPL085W 6588 nt1.89□□□□□ -2.11
CDC43P18898 MLH3YPL164C 2148 nt1.88□□□□□ -2.11
CDC43P18898 ESL2YKR096W 3588 nt1.88□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 134.5 ms