Protein–RNA interactions for Protein: P17536

TPM1, Tropomyosin-1, yeastyeast

Known RBP Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TPM1P17536 NPC2YDL046W 522 nt1.04□□□□□ -2.24
TPM1P17536 PAM16YJL104W 450 nt1.03□□□□□ -2.24
TPM1P17536 IRC23YOR044W 474 nt1.03□□□□□ -2.24
TPM1P17536 YOR108C-AYOR108C-A 210 nt1.03□□□□□ -2.24
TPM1P17536 PAU24YBR301W 363 nt1.03□□□□□ -2.24
TPM1P17536 ZIP2YGL249W 2115 nt1.03□□□□□ -2.25
TPM1P17536 ENV11YGR071C 2583 nt1.02□□□□□ -2.25
TPM1P17536 SMC1YFL008W 3678 nt1.01□□□□□ -2.25
TPM1P17536 TIM13YGR181W 318 nt1.01□□□□□ -2.25
TPM1P17536 YOR199WYOR199W 330 nt1.01□□□□□ -2.25
TPM1P17536 ALY2YJL084C 3141 nt1□□□□□ -2.25
TPM1P17536 CDC39YCR093W 6327 nt1□□□□□ -2.25
TPM1P17536 YHR125WYHR125W 306 nt1□□□□□ -2.25
TPM1P17536 NUP157YER105C 4176 nt1□□□□□ -2.25
TPM1P17536 COG4YPR105C 2586 nt0.99□□□□□ -2.25
TPM1P17536 YKL202WYKL202W 582 nt0.99□□□□□ -2.25
TPM1P17536 ERP4YOR016C 624 nt0.99□□□□□ -2.25
TPM1P17536 RPB10YOR210W 213 nt0.99□□□□□ -2.25
TPM1P17536 SCC2YDR180W 4482 nt0.98□□□□□ -2.25
TPM1P17536 NFU1YKL040C 771 nt0.98□□□□□ -2.25
TPM1P17536 WAR1YML076C 2835 nt0.97□□□□□ -2.25
TPM1P17536 STF2YGR008C 255 nt0.97□□□□□ -2.25
TPM1P17536 YMR290W-AYMR290W-A 348 nt0.96□□□□□ -2.26
TPM1P17536 YBL071CYBL071C 309 nt0.96□□□□□ -2.26
TPM1P17536 SLD3YGL113W 2007 nt0.96□□□□□ -2.26
TPM1P17536 YLR287CYLR287C 1068 nt0.95□□□□□ -2.26
TPM1P17536 IES4YOR189W 351 nt0.95□□□□□ -2.26
TPM1P17536 YDL158CYDL158C 309 nt0.94□□□□□ -2.26
TPM1P17536 YER084W-AYER084W-A 513 nt0.94□□□□□ -2.26
TPM1P17536 GPG1YGL121C 381 nt0.94□□□□□ -2.26
TPM1P17536 AIM29YKR074W 468 nt0.94□□□□□ -2.26
TPM1P17536 ZEO1YOL109W 342 nt0.94□□□□□ -2.26
TPM1P17536 snR54snR54 86 nt0.94□□□□□ -2.26
TPM1P17536 YJR003CYJR003C 1560 nt0.94□□□□□ -2.26
TPM1P17536 IFH1YLR223C 3258 nt0.93□□□□□ -2.26
TPM1P17536 YDL011CYDL011C 324 nt0.92□□□□□ -2.26
TPM1P17536 ALG13YGL047W 609 nt0.92□□□□□ -2.26
TPM1P17536 CDC33YOL139C 642 nt0.92□□□□□ -2.26
TPM1P17536 YPR153WYPR153W 423 nt0.92□□□□□ -2.26
TPM1P17536 YIL142C-AYIL142C-A 333 nt0.91□□□□□ -2.26
TPM1P17536 HUG1YML058W-A 207 nt0.91□□□□□ -2.26
TPM1P17536 YOR029WYOR029W 336 nt0.91□□□□□ -2.26
TPM1P17536 PKH2YOL100W 3246 nt0.91□□□□□ -2.26
TPM1P17536 ECL1YGR146C 636 nt0.9□□□□□ -2.27
TPM1P17536 YGR290WYGR290W 444 nt0.9□□□□□ -2.27
TPM1P17536 YNL122CYNL122C 348 nt0.9□□□□□ -2.27
TPM1P17536 DOP1YDR141C 5097 nt0.9□□□□□ -2.27
TPM1P17536 DBP6YNR038W 1890 nt0.89□□□□□ -2.27
TPM1P17536 BI2Q0110 1272 nt0.89□□□□□ -2.27
TPM1P17536 YJL135WYJL135W 318 nt0.89□□□□□ -2.27
TPM1P17536 YDL196WYDL196W 330 nt0.88□□□□□ -2.27
TPM1P17536 YJL020W-AYJL020W-A 258 nt0.88□□□□□ -2.27
TPM1P17536 YOL160WYOL160W 342 nt0.88□□□□□ -2.27
TPM1P17536 DIE2YGR227W 1578 nt0.87□□□□□ -2.27
TPM1P17536 ISD11YER048W-A 285 nt0.87□□□□□ -2.27
TPM1P17536 CMC4YMR194C-B 222 nt0.87□□□□□ -2.27
TPM1P17536 PAN2YGL094C 3348 nt0.87□□□□□ -2.27
TPM1P17536 NHP2YDL208W 471 nt0.86□□□□□ -2.27
TPM1P17536 YAL016C-BYAL016C-B 186 nt0.86□□□□□ -2.27
TPM1P17536 YOL013W-BYOL013W-B 291 nt0.86□□□□□ -2.27
TPM1P17536 YPL229WYPL229W 621 nt0.86□□□□□ -2.27
TPM1P17536 GEA2YEL022W 4380 nt0.86□□□□□ -2.27
TPM1P17536 YDR521WYDR521W 336 nt0.85□□□□□ -2.27
TPM1P17536 YLR171WYLR171W 390 nt0.85□□□□□ -2.27
TPM1P17536 snR51snR51 107 nt0.85□□□□□ -2.27
TPM1P17536 CUL3YGR003W 2235 nt0.85□□□□□ -2.27
TPM1P17536 YER006C-AYER006C-A 318 nt0.84□□□□□ -2.27
TPM1P17536 YMR141W-AYMR141W-A 225 nt0.84□□□□□ -2.27
TPM1P17536 YOR282WYOR282W 321 nt0.84□□□□□ -2.27
TPM1P17536 YPL261CYPL261C 309 nt0.84□□□□□ -2.27
TPM1P17536 YPR159C-AYPR159C-A 102 nt0.84□□□□□ -2.27
TPM1P17536 YGR042WYGR042W 816 nt0.83□□□□□ -2.28
TPM1P17536 SEC1YDR164C 2175 nt0.83□□□□□ -2.28
TPM1P17536 WIP1YDR374W-A 270 nt0.82□□□□□ -2.28
TPM1P17536 tT(AGU)BtT(AGU)B 73 nt0.82□□□□□ -2.28
TPM1P17536 tT(AGU)CtT(AGU)C 73 nt0.82□□□□□ -2.28
TPM1P17536 tT(AGU)DtT(AGU)D 73 nt0.82□□□□□ -2.28
TPM1P17536 tT(AGU)HtT(AGU)H 73 nt0.82□□□□□ -2.28
TPM1P17536 tT(AGU)I1tT(AGU)I1 73 nt0.82□□□□□ -2.28
TPM1P17536 tT(AGU)I2tT(AGU)I2 73 nt0.82□□□□□ -2.28
TPM1P17536 tT(AGU)JtT(AGU)J 73 nt0.82□□□□□ -2.28
TPM1P17536 tT(AGU)N1tT(AGU)N1 73 nt0.82□□□□□ -2.28
TPM1P17536 tT(AGU)N2tT(AGU)N2 73 nt0.82□□□□□ -2.28
TPM1P17536 tT(AGU)O1tT(AGU)O1 73 nt0.82□□□□□ -2.28
TPM1P17536 tT(AGU)O2tT(AGU)O2 73 nt0.82□□□□□ -2.28
TPM1P17536 YNL058CYNL058C 951 nt0.82□□□□□ -2.28
TPM1P17536 YIR044CYIR044C 186 nt0.81□□□□□ -2.28
TPM1P17536 snR189snR189 189 nt0.81□□□□□ -2.28
TPM1P17536 LOA1YPR139C 903 nt0.81□□□□□ -2.28
TPM1P17536 snR72snR72 98 nt0.8□□□□□ -2.28
TPM1P17536 SWF1YDR126W 1011 nt0.8□□□□□ -2.28
TPM1P17536 YHR063W-AYHR063W-A 336 nt0.8□□□□□ -2.28
TPM1P17536 FYV7YLR068W 456 nt0.8□□□□□ -2.28
TPM1P17536 RPS30BYOR182C 192 nt0.8□□□□□ -2.28
TPM1P17536 RAD34YDR314C 2079 nt0.8□□□□□ -2.28
TPM1P17536 PAC1YOR269W 1485 nt0.8□□□□□ -2.28
TPM1P17536 YKL083WYKL083W 615 nt0.79□□□□□ -2.28
TPM1P17536 SDH7YDR511W 402 nt0.78□□□□□ -2.28
TPM1P17536 YAR047CYAR047C 321 nt0.78□□□□□ -2.28
TPM1P17536 INP2YMR163C 2118 nt0.78□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 12.5 ms