Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC34.82■■■■□ 3.17
CFTRP13569 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
CFTRP13569 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC34.82■■■■□ 3.16
CFTRP13569 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC34.82■■■■□ 3.16
CFTRP13569 ECEL1P2-202ENST00000465689 757 ntBASIC34.82■■■■□ 3.16
CFTRP13569 AL031985.4-201ENST00000642138 673 ntBASIC34.82■■■■□ 3.16
CFTRP13569 ME2-206ENST00000638410 2289 ntTSL 5 BASIC34.82■■■■□ 3.16
CFTRP13569 ME2-210ENST00000639255 2262 ntTSL 5 BASIC34.82■■■■□ 3.16
CFTRP13569 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC34.82■■■■□ 3.16
CFTRP13569 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC34.81■■■■□ 3.16
CFTRP13569 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
CFTRP13569 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
CFTRP13569 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
CFTRP13569 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC34.81■■■■□ 3.16
CFTRP13569 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC34.81■■■■□ 3.16
CFTRP13569 FAM8A6P-201ENST00000407496 1135 ntBASIC34.81■■■■□ 3.16
CFTRP13569 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
CFTRP13569 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC34.81■■■■□ 3.16
CFTRP13569 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC34.81■■■■□ 3.16
CFTRP13569 TOLLIP-AS1-201ENST00000530897 939 ntBASIC34.81■■■■□ 3.16
CFTRP13569 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
CFTRP13569 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC34.81■■■■□ 3.16
CFTRP13569 METTL23-204ENST00000586752 904 ntTSL 2 BASIC34.81■■■■□ 3.16
CFTRP13569 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC34.81■■■■□ 3.16
CFTRP13569 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC34.81■■■■□ 3.16
CFTRP13569 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
CFTRP13569 FSCN1P1-201ENST00000568912 1481 ntBASIC34.8■■■■□ 3.16
CFTRP13569 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC34.8■■■■□ 3.16
CFTRP13569 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CFTRP13569 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC34.8■■■■□ 3.16
CFTRP13569 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC34.8■■■■□ 3.16
CFTRP13569 CRYGFP-201ENST00000418459 633 ntBASIC34.8■■■■□ 3.16
CFTRP13569 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC34.8■■■■□ 3.16
CFTRP13569 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC34.8■■■■□ 3.16
CFTRP13569 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC34.8■■■■□ 3.16
CFTRP13569 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC34.8■■■■□ 3.16
CFTRP13569 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
CFTRP13569 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
CFTRP13569 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC34.8■■■■□ 3.16
CFTRP13569 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC34.79■■■■□ 3.16
CFTRP13569 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CFTRP13569 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
CFTRP13569 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CFTRP13569 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CFTRP13569 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC34.79■■■■□ 3.16
CFTRP13569 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC34.79■■■■□ 3.16
CFTRP13569 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CFTRP13569 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
CFTRP13569 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC34.78■■■■□ 3.16
CFTRP13569 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC34.78■■■■□ 3.16
CFTRP13569 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
CFTRP13569 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC34.78■■■■□ 3.16
CFTRP13569 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC34.78■■■■□ 3.16
CFTRP13569 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC34.78■■■■□ 3.16
CFTRP13569 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
CFTRP13569 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
CFTRP13569 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
CFTRP13569 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
CFTRP13569 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC34.78■■■■□ 3.16
CFTRP13569 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC34.78■■■■□ 3.16
CFTRP13569 AC091076.1-201ENST00000610741 619 ntBASIC34.78■■■■□ 3.16
CFTRP13569 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
CFTRP13569 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC34.77■■■■□ 3.16
CFTRP13569 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC34.77■■■■□ 3.16
CFTRP13569 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CFTRP13569 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CFTRP13569 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CFTRP13569 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC34.77■■■■□ 3.16
CFTRP13569 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC34.77■■■■□ 3.16
CFTRP13569 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC34.77■■■■□ 3.16
CFTRP13569 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CFTRP13569 INGX-201ENST00000359239 846 ntBASIC34.77■■■■□ 3.16
CFTRP13569 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC34.77■■■■□ 3.16
CFTRP13569 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC34.77■■■■□ 3.16
CFTRP13569 AC117947.1-201ENST00000427448 529 ntBASIC34.77■■■■□ 3.16
CFTRP13569 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC34.77■■■■□ 3.16
CFTRP13569 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC34.77■■■■□ 3.16
CFTRP13569 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC34.76■■■■□ 3.16
CFTRP13569 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC34.76■■■■□ 3.16
CFTRP13569 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC34.76■■■■□ 3.16
CFTRP13569 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC34.76■■■■□ 3.16
CFTRP13569 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
CFTRP13569 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
CFTRP13569 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC34.76■■■■□ 3.15
CFTRP13569 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC34.76■■■■□ 3.15
CFTRP13569 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC34.75■■■■□ 3.15
CFTRP13569 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC34.75■■■■□ 3.15
CFTRP13569 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC34.75■■■■□ 3.15
CFTRP13569 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CFTRP13569 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC34.75■■■■□ 3.15
CFTRP13569 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC34.75■■■■□ 3.15
CFTRP13569 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC34.75■■■■□ 3.15
CFTRP13569 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC34.75■■■■□ 3.15
CFTRP13569 AL121894.2-201ENST00000602977 491 ntBASIC34.75■■■■□ 3.15
CFTRP13569 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
CFTRP13569 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
CFTRP13569 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC34.74■■■■□ 3.15
CFTRP13569 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
CFTRP13569 AK4P3-201ENST00000418260 669 ntBASIC34.74■■■■□ 3.15
CFTRP13569 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC34.74■■■■□ 3.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms