Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.68■□□□□ 0.26
CTSDP07339 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTSDP07339 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC16.68■□□□□ 0.26
CTSDP07339 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTSDP07339 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTSDP07339 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTSDP07339 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTSDP07339 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.68■□□□□ 0.26
CTSDP07339 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTSDP07339 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CTSDP07339 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CTSDP07339 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTSDP07339 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.68■□□□□ 0.26
CTSDP07339 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.68■□□□□ 0.26
CTSDP07339 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTSDP07339 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTSDP07339 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CTSDP07339 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTSDP07339 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTSDP07339 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.68■□□□□ 0.26
CTSDP07339 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTSDP07339 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.67■□□□□ 0.26
CTSDP07339 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.67■□□□□ 0.26
CTSDP07339 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTSDP07339 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CTSDP07339 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTSDP07339 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
CTSDP07339 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTSDP07339 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTSDP07339 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTSDP07339 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTSDP07339 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTSDP07339 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.67■□□□□ 0.26
CTSDP07339 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.67■□□□□ 0.26
CTSDP07339 AC096631.2-201ENST00000436136 790 ntBASIC16.67■□□□□ 0.26
CTSDP07339 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC16.67■□□□□ 0.26
CTSDP07339 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC16.67■□□□□ 0.26
CTSDP07339 AL136162.1-201ENST00000607711 1078 ntBASIC16.67■□□□□ 0.26
CTSDP07339 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTSDP07339 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTSDP07339 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTSDP07339 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CTSDP07339 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.67■□□□□ 0.26
CTSDP07339 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.67■□□□□ 0.26
CTSDP07339 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTSDP07339 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTSDP07339 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.67■□□□□ 0.26
CTSDP07339 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.67■□□□□ 0.26
CTSDP07339 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.67■□□□□ 0.26
CTSDP07339 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTSDP07339 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTSDP07339 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.67■□□□□ 0.26
CTSDP07339 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTSDP07339 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTSDP07339 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CTSDP07339 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.66■□□□□ 0.26
CTSDP07339 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTSDP07339 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSDP07339 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CTSDP07339 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.66■□□□□ 0.26
CTSDP07339 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.66■□□□□ 0.26
CTSDP07339 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.66■□□□□ 0.26
CTSDP07339 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSDP07339 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSDP07339 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CTSDP07339 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CTSDP07339 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CTSDP07339 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CTSDP07339 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CTSDP07339 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSDP07339 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSDP07339 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CTSDP07339 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.66■□□□□ 0.26
CTSDP07339 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.66■□□□□ 0.26
CTSDP07339 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTSDP07339 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CTSDP07339 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CTSDP07339 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CTSDP07339 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CTSDP07339 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CTSDP07339 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.65■□□□□ 0.26
CTSDP07339 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CTSDP07339 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CTSDP07339 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTSDP07339 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSDP07339 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
CTSDP07339 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTSDP07339 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.65■□□□□ 0.26
CTSDP07339 AC027682.1-201ENST00000562846 899 ntBASIC16.65■□□□□ 0.26
CTSDP07339 AC138907.5-202ENST00000569484 235 ntBASIC16.65■□□□□ 0.26
CTSDP07339 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CTSDP07339 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSDP07339 KRT87P-202ENST00000534226 1464 ntBASIC16.65■□□□□ 0.26
CTSDP07339 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSDP07339 AC135279.3-201ENST00000610945 1311 ntBASIC16.65■□□□□ 0.26
CTSDP07339 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CTSDP07339 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSDP07339 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSDP07339 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CTSDP07339 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms