Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPXO76031 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.21■□□□□ 0.51
CLPXO76031 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLPXO76031 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLPXO76031 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLPXO76031 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLPXO76031 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLPXO76031 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLPXO76031 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLPXO76031 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLPXO76031 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLPXO76031 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLPXO76031 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.21■□□□□ 0.51
CLPXO76031 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.21■□□□□ 0.51
CLPXO76031 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CLPXO76031 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CLPXO76031 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLPXO76031 AL499627.2-201ENST00000606283 725 ntBASIC18.21■□□□□ 0.51
CLPXO76031 pRNA.6-201ENST00000610482 90 ntBASIC18.21■□□□□ 0.51
CLPXO76031 pRNA.5-201ENST00000612139 90 ntBASIC18.21■□□□□ 0.51
CLPXO76031 pRNA.11-201ENST00000618423 90 ntBASIC18.21■□□□□ 0.51
CLPXO76031 pRNA.13-201ENST00000619112 90 ntBASIC18.21■□□□□ 0.51
CLPXO76031 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLPXO76031 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.21■□□□□ 0.51
CLPXO76031 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CLPXO76031 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLPXO76031 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CLPXO76031 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLPXO76031 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.2■□□□□ 0.5
CLPXO76031 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLPXO76031 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLPXO76031 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLPXO76031 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CLPXO76031 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLPXO76031 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CLPXO76031 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLPXO76031 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLPXO76031 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CLPXO76031 AL136162.1-201ENST00000607711 1078 ntBASIC18.2■□□□□ 0.5
CLPXO76031 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.2■□□□□ 0.5
CLPXO76031 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLPXO76031 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CLPXO76031 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.2■□□□□ 0.5
CLPXO76031 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.19■□□□□ 0.5
CLPXO76031 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CLPXO76031 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.19■□□□□ 0.5
CLPXO76031 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLPXO76031 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.19■□□□□ 0.5
CLPXO76031 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.19■□□□□ 0.5
CLPXO76031 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLPXO76031 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLPXO76031 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CLPXO76031 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.19■□□□□ 0.5
CLPXO76031 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.19■□□□□ 0.5
CLPXO76031 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLPXO76031 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
CLPXO76031 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.19■□□□□ 0.5
CLPXO76031 SYT6-210ENST00000641643 1587 ntBASIC18.19■□□□□ 0.5
CLPXO76031 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLPXO76031 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLPXO76031 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLPXO76031 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLPXO76031 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLPXO76031 AC135279.3-201ENST00000610945 1311 ntBASIC18.19■□□□□ 0.5
CLPXO76031 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLPXO76031 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.18■□□□□ 0.5
CLPXO76031 AC092720.2-201ENST00000602388 1665 ntBASIC18.18■□□□□ 0.5
CLPXO76031 AL032819.2-201ENST00000624543 2162 ntBASIC18.18■□□□□ 0.5
CLPXO76031 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CLPXO76031 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLPXO76031 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLPXO76031 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CLPXO76031 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
CLPXO76031 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.18■□□□□ 0.5
CLPXO76031 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLPXO76031 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLPXO76031 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.18■□□□□ 0.5
CLPXO76031 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CLPXO76031 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLPXO76031 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
CLPXO76031 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLPXO76031 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLPXO76031 ZNRF2P3-201ENST00000424200 374 ntBASIC18.18■□□□□ 0.5
CLPXO76031 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.18■□□□□ 0.5
CLPXO76031 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.18■□□□□ 0.5
CLPXO76031 SUDS3P1-201ENST00000505831 966 ntBASIC18.18■□□□□ 0.5
CLPXO76031 AL031432.3-201ENST00000607698 485 ntBASIC18.18■□□□□ 0.5
CLPXO76031 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CLPXO76031 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.18■□□□□ 0.5
CLPXO76031 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CLPXO76031 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.18■□□□□ 0.5
CLPXO76031 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLPXO76031 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.18■□□□□ 0.5
CLPXO76031 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CLPXO76031 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLPXO76031 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CLPXO76031 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.18■□□□□ 0.5
CLPXO76031 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLPXO76031 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLPXO76031 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms