Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SUPT3HO75486 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SUPT3HO75486 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SUPT3HO75486 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.9■□□□□ 0.78
SUPT3HO75486 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SUPT3HO75486 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SUPT3HO75486 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SUPT3HO75486 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SUPT3HO75486 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SUPT3HO75486 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SUPT3HO75486 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SUPT3HO75486 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SUPT3HO75486 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.89■□□□□ 0.77
SUPT3HO75486 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SUPT3HO75486 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SUPT3HO75486 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SUPT3HO75486 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.89■□□□□ 0.77
SUPT3HO75486 MIR6821-201ENST00000617625 74 ntBASIC19.89■□□□□ 0.77
SUPT3HO75486 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SUPT3HO75486 AC010536.3-201ENST00000620306 533 ntBASIC19.89■□□□□ 0.77
SUPT3HO75486 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.89■□□□□ 0.77
SUPT3HO75486 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SUPT3HO75486 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SUPT3HO75486 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SUPT3HO75486 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SUPT3HO75486 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SUPT3HO75486 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SUPT3HO75486 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.88■□□□□ 0.77
SUPT3HO75486 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SUPT3HO75486 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.88■□□□□ 0.77
SUPT3HO75486 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SUPT3HO75486 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SUPT3HO75486 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.88■□□□□ 0.77
SUPT3HO75486 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.88■□□□□ 0.77
SUPT3HO75486 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.88■□□□□ 0.77
SUPT3HO75486 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SUPT3HO75486 TERF1P5-201ENST00000477545 1207 ntBASIC19.88■□□□□ 0.77
SUPT3HO75486 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SUPT3HO75486 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SUPT3HO75486 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SUPT3HO75486 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.88■□□□□ 0.77
SUPT3HO75486 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SUPT3HO75486 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SUPT3HO75486 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.88■□□□□ 0.77
SUPT3HO75486 DPP3P2-201ENST00000416030 1696 ntBASIC19.87■□□□□ 0.77
SUPT3HO75486 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SUPT3HO75486 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SUPT3HO75486 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
SUPT3HO75486 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SUPT3HO75486 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SUPT3HO75486 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SUPT3HO75486 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SUPT3HO75486 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
SUPT3HO75486 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SUPT3HO75486 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SUPT3HO75486 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SUPT3HO75486 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.87■□□□□ 0.77
SUPT3HO75486 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SUPT3HO75486 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.87■□□□□ 0.77
SUPT3HO75486 AC137761.2-201ENST00000561729 223 ntBASIC19.87■□□□□ 0.77
SUPT3HO75486 AC145350.3-201ENST00000569033 163 ntBASIC19.87■□□□□ 0.77
SUPT3HO75486 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
SUPT3HO75486 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SUPT3HO75486 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.87■□□□□ 0.77
SUPT3HO75486 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SUPT3HO75486 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SUPT3HO75486 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.87■□□□□ 0.77
SUPT3HO75486 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.87■□□□□ 0.77
SUPT3HO75486 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SUPT3HO75486 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SUPT3HO75486 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SUPT3HO75486 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SUPT3HO75486 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SUPT3HO75486 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.86■□□□□ 0.77
SUPT3HO75486 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.86■□□□□ 0.77
SUPT3HO75486 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
SUPT3HO75486 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.86■□□□□ 0.77
SUPT3HO75486 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.86■□□□□ 0.77
SUPT3HO75486 AL591742.1-201ENST00000604433 565 ntBASIC19.86■□□□□ 0.77
SUPT3HO75486 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SUPT3HO75486 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
SUPT3HO75486 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SUPT3HO75486 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SUPT3HO75486 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SUPT3HO75486 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SUPT3HO75486 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.85■□□□□ 0.77
SUPT3HO75486 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.85■□□□□ 0.77
SUPT3HO75486 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
SUPT3HO75486 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SUPT3HO75486 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
SUPT3HO75486 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SUPT3HO75486 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
SUPT3HO75486 TCF3P1-201ENST00000423021 1937 ntBASIC19.85■□□□□ 0.77
SUPT3HO75486 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SUPT3HO75486 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SUPT3HO75486 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SUPT3HO75486 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.85■□□□□ 0.77
SUPT3HO75486 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.85■□□□□ 0.77
SUPT3HO75486 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.85■□□□□ 0.77
SUPT3HO75486 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms