Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VEGFDO43915 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.77■□□□□ 0.76
VEGFDO43915 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VEGFDO43915 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
VEGFDO43915 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.77■□□□□ 0.76
VEGFDO43915 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
VEGFDO43915 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
VEGFDO43915 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.77■□□□□ 0.76
VEGFDO43915 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.77■□□□□ 0.76
VEGFDO43915 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
VEGFDO43915 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
VEGFDO43915 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
VEGFDO43915 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.77■□□□□ 0.76
VEGFDO43915 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
VEGFDO43915 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
VEGFDO43915 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VEGFDO43915 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
VEGFDO43915 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VEGFDO43915 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VEGFDO43915 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VEGFDO43915 FEM1AP1-201ENST00000431297 1995 ntBASIC19.76■□□□□ 0.75
VEGFDO43915 AP005212.1-201ENST00000581547 1997 ntBASIC19.76■□□□□ 0.75
VEGFDO43915 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
VEGFDO43915 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
VEGFDO43915 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VEGFDO43915 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
VEGFDO43915 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.76■□□□□ 0.75
VEGFDO43915 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.76■□□□□ 0.75
VEGFDO43915 AC120498.8-201ENST00000614275 531 ntBASIC19.76■□□□□ 0.75
VEGFDO43915 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
VEGFDO43915 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
VEGFDO43915 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.76■□□□□ 0.75
VEGFDO43915 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
VEGFDO43915 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.75■□□□□ 0.75
VEGFDO43915 AC073314.1-201ENST00000568729 2216 ntBASIC19.75■□□□□ 0.75
VEGFDO43915 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.75■□□□□ 0.75
VEGFDO43915 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VEGFDO43915 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VEGFDO43915 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VEGFDO43915 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VEGFDO43915 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VEGFDO43915 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VEGFDO43915 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VEGFDO43915 KRT17P3-201ENST00000420566 1262 ntBASIC19.75■□□□□ 0.75
VEGFDO43915 POM121L13P-201ENST00000422362 380 ntBASIC19.75■□□□□ 0.75
VEGFDO43915 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.75■□□□□ 0.75
VEGFDO43915 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.75■□□□□ 0.75
VEGFDO43915 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.75■□□□□ 0.75
VEGFDO43915 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VEGFDO43915 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.75■□□□□ 0.75
VEGFDO43915 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.75■□□□□ 0.75
VEGFDO43915 ITM2C-210ENST00000620962 501 ntBASIC19.75■□□□□ 0.75
VEGFDO43915 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VEGFDO43915 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.75■□□□□ 0.75
VEGFDO43915 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VEGFDO43915 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.75■□□□□ 0.75
VEGFDO43915 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
VEGFDO43915 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
VEGFDO43915 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VEGFDO43915 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.75■□□□□ 0.75
VEGFDO43915 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.75■□□□□ 0.75
VEGFDO43915 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
VEGFDO43915 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VEGFDO43915 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VEGFDO43915 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VEGFDO43915 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VEGFDO43915 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VEGFDO43915 GABARAPL3-202ENST00000624044 1851 ntBASIC19.74■□□□□ 0.75
VEGFDO43915 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.74■□□□□ 0.75
VEGFDO43915 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.74■□□□□ 0.75
VEGFDO43915 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.74■□□□□ 0.75
VEGFDO43915 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.74■□□□□ 0.75
VEGFDO43915 AC006058.3-201ENST00000606217 1069 ntBASIC19.74■□□□□ 0.75
VEGFDO43915 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VEGFDO43915 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VEGFDO43915 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
VEGFDO43915 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VEGFDO43915 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VEGFDO43915 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
VEGFDO43915 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.74■□□□□ 0.75
VEGFDO43915 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.74■□□□□ 0.75
VEGFDO43915 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VEGFDO43915 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
VEGFDO43915 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VEGFDO43915 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.74■□□□□ 0.75
VEGFDO43915 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
VEGFDO43915 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VEGFDO43915 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
VEGFDO43915 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VEGFDO43915 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VEGFDO43915 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
VEGFDO43915 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VEGFDO43915 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.73■□□□□ 0.75
VEGFDO43915 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.73■□□□□ 0.75
VEGFDO43915 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.73■□□□□ 0.75
VEGFDO43915 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
VEGFDO43915 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
VEGFDO43915 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VEGFDO43915 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VEGFDO43915 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms