Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
NPHP1O15259 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC25.39■■□□□ 1.65
NPHP1O15259 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
NPHP1O15259 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
NPHP1O15259 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NPHP1O15259 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
NPHP1O15259 MMP23A-201ENST00000234610 1017 ntBASIC25.38■■□□□ 1.65
NPHP1O15259 AL353807.1-201ENST00000427475 662 ntBASIC25.38■■□□□ 1.65
NPHP1O15259 KRT16P5-201ENST00000455284 522 ntBASIC25.38■■□□□ 1.65
NPHP1O15259 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
NPHP1O15259 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC25.38■■□□□ 1.65
NPHP1O15259 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC25.38■■□□□ 1.65
NPHP1O15259 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC25.38■■□□□ 1.65
NPHP1O15259 Six3os1_6.1-201ENST00000620790 196 ntBASIC25.38■■□□□ 1.65
NPHP1O15259 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
NPHP1O15259 DECR2-212ENST00000627716 352 ntTSL 2 BASIC25.38■■□□□ 1.65
NPHP1O15259 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
NPHP1O15259 NBPF21P-201ENST00000425093 1451 ntBASIC25.38■■□□□ 1.65
NPHP1O15259 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
NPHP1O15259 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
NPHP1O15259 AC124283.5-201ENST00000624661 1809 ntBASIC25.37■■□□□ 1.65
NPHP1O15259 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
NPHP1O15259 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NPHP1O15259 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC25.37■■□□□ 1.65
NPHP1O15259 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NPHP1O15259 FAM197Y1-201ENST00000421178 764 ntBASIC25.37■■□□□ 1.65
NPHP1O15259 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
NPHP1O15259 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.37■■□□□ 1.65
NPHP1O15259 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
NPHP1O15259 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NPHP1O15259 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NPHP1O15259 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
NPHP1O15259 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NPHP1O15259 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
NPHP1O15259 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NPHP1O15259 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
NPHP1O15259 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
NPHP1O15259 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NPHP1O15259 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
NPHP1O15259 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NPHP1O15259 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC25.36■■□□□ 1.65
NPHP1O15259 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NPHP1O15259 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NPHP1O15259 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC25.36■■□□□ 1.65
NPHP1O15259 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC25.36■■□□□ 1.65
NPHP1O15259 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NPHP1O15259 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC25.36■■□□□ 1.65
NPHP1O15259 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NPHP1O15259 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC25.36■■□□□ 1.65
NPHP1O15259 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC25.36■■□□□ 1.65
NPHP1O15259 AC012306.2-201ENST00000609350 630 ntBASIC25.36■■□□□ 1.65
NPHP1O15259 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC25.36■■□□□ 1.65
NPHP1O15259 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC25.36■■□□□ 1.65
NPHP1O15259 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NPHP1O15259 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC25.36■■□□□ 1.65
NPHP1O15259 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NPHP1O15259 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NPHP1O15259 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NPHP1O15259 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NPHP1O15259 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
NPHP1O15259 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
NPHP1O15259 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NPHP1O15259 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NPHP1O15259 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NPHP1O15259 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NPHP1O15259 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC25.35■■□□□ 1.65
NPHP1O15259 DYM-203ENST00000442713 2147 ntTSL 2 BASIC25.35■■□□□ 1.65
NPHP1O15259 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC25.35■■□□□ 1.65
NPHP1O15259 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC25.35■■□□□ 1.65
NPHP1O15259 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC25.35■■□□□ 1.65
NPHP1O15259 GRAP-204ENST00000573099 846 ntTSL 3 BASIC25.35■■□□□ 1.65
NPHP1O15259 AL353708.3-201ENST00000610272 989 ntBASIC25.35■■□□□ 1.65
NPHP1O15259 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NPHP1O15259 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC25.34■■□□□ 1.65
NPHP1O15259 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NPHP1O15259 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
NPHP1O15259 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NPHP1O15259 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
NPHP1O15259 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
NPHP1O15259 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
NPHP1O15259 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
NPHP1O15259 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC25.34■■□□□ 1.65
NPHP1O15259 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC25.34■■□□□ 1.65
NPHP1O15259 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC25.34■■□□□ 1.65
NPHP1O15259 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
NPHP1O15259 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
NPHP1O15259 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC25.34■■□□□ 1.65
NPHP1O15259 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NPHP1O15259 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
NPHP1O15259 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
NPHP1O15259 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC25.33■■□□□ 1.65
NPHP1O15259 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NPHP1O15259 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NPHP1O15259 GUSBP5-202ENST00000510805 1989 ntBASIC25.33■■□□□ 1.65
NPHP1O15259 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NPHP1O15259 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC25.33■■□□□ 1.65
NPHP1O15259 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC25.33■■□□□ 1.65
NPHP1O15259 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NPHP1O15259 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC25.33■■□□□ 1.65
NPHP1O15259 RN7SL850P-201ENST00000579959 291 ntBASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms