Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
CHD1O14646 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC33■■■□□ 2.87
CHD1O14646 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC33■■■□□ 2.87
CHD1O14646 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC33■■■□□ 2.87
CHD1O14646 HIST1H2APS4-201ENST00000362070 348 ntBASIC32.99■■■□□ 2.87
CHD1O14646 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
CHD1O14646 AP000347.1-202ENST00000435868 847 ntBASIC32.99■■■□□ 2.87
CHD1O14646 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC32.99■■■□□ 2.87
CHD1O14646 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CHD1O14646 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CHD1O14646 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
CHD1O14646 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC32.99■■■□□ 2.87
CHD1O14646 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CHD1O14646 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
CHD1O14646 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
CHD1O14646 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
CHD1O14646 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC32.98■■■□□ 2.87
CHD1O14646 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC32.98■■■□□ 2.87
CHD1O14646 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
CHD1O14646 AC011506.1-201ENST00000474329 610 ntBASIC32.98■■■□□ 2.87
CHD1O14646 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC32.98■■■□□ 2.87
CHD1O14646 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC32.97■■■□□ 2.87
CHD1O14646 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC32.97■■■□□ 2.87
CHD1O14646 AC097488.1-201ENST00000507834 756 ntBASIC32.97■■■□□ 2.87
CHD1O14646 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC32.97■■■□□ 2.87
CHD1O14646 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC32.97■■■□□ 2.87
CHD1O14646 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC32.97■■■□□ 2.87
CHD1O14646 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC32.97■■■□□ 2.87
CHD1O14646 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC32.97■■■□□ 2.87
CHD1O14646 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC32.97■■■□□ 2.87
CHD1O14646 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC32.97■■■□□ 2.87
CHD1O14646 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC32.97■■■□□ 2.87
CHD1O14646 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC32.97■■■□□ 2.87
CHD1O14646 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC32.96■■■□□ 2.87
CHD1O14646 PKM-204ENST00000449901 2526 ntTSL 2 BASIC32.96■■■□□ 2.87
CHD1O14646 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
CHD1O14646 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC32.96■■■□□ 2.87
CHD1O14646 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC32.96■■■□□ 2.87
CHD1O14646 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
CHD1O14646 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC32.96■■■□□ 2.87
CHD1O14646 KRT18P16-201ENST00000510337 1294 ntBASIC32.96■■■□□ 2.87
CHD1O14646 IRF5-214ENST00000613821 595 ntTSL 5 BASIC32.96■■■□□ 2.87
CHD1O14646 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC32.96■■■□□ 2.87
CHD1O14646 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
CHD1O14646 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC32.95■■■□□ 2.87
CHD1O14646 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC32.95■■■□□ 2.87
CHD1O14646 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
CHD1O14646 CD70-202ENST00000423145 881 ntTSL 2 BASIC32.95■■■□□ 2.87
CHD1O14646 TSPY5P-201ENST00000426936 936 ntBASIC32.95■■■□□ 2.87
CHD1O14646 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC32.95■■■□□ 2.87
CHD1O14646 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC32.95■■■□□ 2.87
CHD1O14646 AL445675.2-201ENST00000620291 557 ntBASIC32.95■■■□□ 2.87
CHD1O14646 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC32.95■■■□□ 2.87
CHD1O14646 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.86
CHD1O14646 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC32.95■■■□□ 2.86
CHD1O14646 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CHD1O14646 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CHD1O14646 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC32.94■■■□□ 2.86
CHD1O14646 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC32.94■■■□□ 2.86
CHD1O14646 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
CHD1O14646 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC32.94■■■□□ 2.86
CHD1O14646 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC32.94■■■□□ 2.86
CHD1O14646 STK25-205ENST00000405883 1904 ntTSL 2 BASIC32.94■■■□□ 2.86
CHD1O14646 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC32.94■■■□□ 2.86
CHD1O14646 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC32.94■■■□□ 2.86
CHD1O14646 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
CHD1O14646 AL671277.2-201ENST00000458060 996 ntBASIC32.94■■■□□ 2.86
CHD1O14646 AL691432.3-201ENST00000621860 400 ntBASIC32.94■■■□□ 2.86
CHD1O14646 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC32.94■■■□□ 2.86
CHD1O14646 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC32.93■■■□□ 2.86
CHD1O14646 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC32.93■■■□□ 2.86
CHD1O14646 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
CHD1O14646 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC32.93■■■□□ 2.86
CHD1O14646 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
CHD1O14646 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC32.92■■■□□ 2.86
CHD1O14646 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC32.92■■■□□ 2.86
CHD1O14646 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC32.92■■■□□ 2.86
CHD1O14646 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC32.92■■■□□ 2.86
CHD1O14646 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CHD1O14646 AC004263.2-201ENST00000617183 678 ntBASIC32.92■■■□□ 2.86
CHD1O14646 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC32.92■■■□□ 2.86
CHD1O14646 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC32.92■■■□□ 2.86
CHD1O14646 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
CHD1O14646 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC32.91■■■□□ 2.86
CHD1O14646 COX11P1-201ENST00000489116 835 ntBASIC32.91■■■□□ 2.86
CHD1O14646 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CHD1O14646 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC32.91■■■□□ 2.86
CHD1O14646 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC32.91■■■□□ 2.86
CHD1O14646 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CHD1O14646 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
CHD1O14646 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC32.91■■■□□ 2.86
CHD1O14646 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC32.91■■■□□ 2.86
CHD1O14646 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CHD1O14646 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC32.91■■■□□ 2.86
CHD1O14646 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC32.9■■■□□ 2.86
CHD1O14646 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CHD1O14646 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
CHD1O14646 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC32.9■■■□□ 2.86
CHD1O14646 AC008622.2-201ENST00000617006 1229 ntBASIC32.9■■■□□ 2.86
CHD1O14646 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC32.9■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms