Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.53■□□□□ 0.72
UBFD1O14562 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
UBFD1O14562 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.53■□□□□ 0.72
UBFD1O14562 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBFD1O14562 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.53■□□□□ 0.72
UBFD1O14562 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.53■□□□□ 0.72
UBFD1O14562 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBFD1O14562 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.53■□□□□ 0.72
UBFD1O14562 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
UBFD1O14562 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
UBFD1O14562 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBFD1O14562 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
UBFD1O14562 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.53■□□□□ 0.72
UBFD1O14562 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UBFD1O14562 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
UBFD1O14562 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.52■□□□□ 0.72
UBFD1O14562 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBFD1O14562 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBFD1O14562 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.52■□□□□ 0.72
UBFD1O14562 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBFD1O14562 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.52■□□□□ 0.72
UBFD1O14562 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.52■□□□□ 0.72
UBFD1O14562 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBFD1O14562 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBFD1O14562 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBFD1O14562 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBFD1O14562 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBFD1O14562 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UBFD1O14562 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
UBFD1O14562 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBFD1O14562 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
UBFD1O14562 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBFD1O14562 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBFD1O14562 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBFD1O14562 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.52■□□□□ 0.72
UBFD1O14562 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UBFD1O14562 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.52■□□□□ 0.72
UBFD1O14562 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.71
UBFD1O14562 TREX1-205ENST00000625293 1783 ntBASIC19.52■□□□□ 0.71
UBFD1O14562 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.52■□□□□ 0.71
UBFD1O14562 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.52■□□□□ 0.71
UBFD1O14562 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
UBFD1O14562 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBFD1O14562 PTBP1P-201ENST00000554374 1601 ntBASIC19.51■□□□□ 0.71
UBFD1O14562 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBFD1O14562 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBFD1O14562 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
UBFD1O14562 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBFD1O14562 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.51■□□□□ 0.71
UBFD1O14562 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBFD1O14562 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
UBFD1O14562 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.51■□□□□ 0.71
UBFD1O14562 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBFD1O14562 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.51■□□□□ 0.71
UBFD1O14562 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
UBFD1O14562 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBFD1O14562 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBFD1O14562 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
UBFD1O14562 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
UBFD1O14562 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
UBFD1O14562 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
UBFD1O14562 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBFD1O14562 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.5■□□□□ 0.71
UBFD1O14562 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBFD1O14562 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBFD1O14562 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBFD1O14562 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBFD1O14562 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
UBFD1O14562 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.5■□□□□ 0.71
UBFD1O14562 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBFD1O14562 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.5■□□□□ 0.71
UBFD1O14562 PGM5P4-201ENST00000421970 445 ntBASIC19.5■□□□□ 0.71
UBFD1O14562 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.5■□□□□ 0.71
UBFD1O14562 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.5■□□□□ 0.71
UBFD1O14562 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
UBFD1O14562 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
UBFD1O14562 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.5■□□□□ 0.71
UBFD1O14562 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBFD1O14562 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.5■□□□□ 0.71
UBFD1O14562 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
UBFD1O14562 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
UBFD1O14562 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
UBFD1O14562 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBFD1O14562 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBFD1O14562 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.5■□□□□ 0.71
UBFD1O14562 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
UBFD1O14562 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
UBFD1O14562 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBFD1O14562 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBFD1O14562 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBFD1O14562 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
UBFD1O14562 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
UBFD1O14562 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.49■□□□□ 0.71
UBFD1O14562 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.49■□□□□ 0.71
UBFD1O14562 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
UBFD1O14562 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
UBFD1O14562 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
UBFD1O14562 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.49■□□□□ 0.71
UBFD1O14562 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
UBFD1O14562 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms