Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC28A1O00337 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC28A1O00337 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC28A1O00337 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC28A1O00337 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC28A1O00337 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC28A1O00337 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SLC28A1O00337 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
SLC28A1O00337 AC007322.4-201ENST00000509611 723 ntBASIC19.37■□□□□ 0.69
SLC28A1O00337 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.37■□□□□ 0.69
SLC28A1O00337 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
SLC28A1O00337 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SLC28A1O00337 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC28A1O00337 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC28A1O00337 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC28A1O00337 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC28A1O00337 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC28A1O00337 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC28A1O00337 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SLC28A1O00337 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC28A1O00337 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC28A1O00337 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC28A1O00337 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SLC28A1O00337 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.36■□□□□ 0.69
SLC28A1O00337 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.36■□□□□ 0.69
SLC28A1O00337 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC28A1O00337 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.36■□□□□ 0.69
SLC28A1O00337 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC28A1O00337 AC013268.1-206ENST00000638368 961 ntBASIC19.36■□□□□ 0.69
SLC28A1O00337 AC112229.1-201ENST00000639295 961 ntBASIC19.36■□□□□ 0.69
SLC28A1O00337 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC28A1O00337 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC28A1O00337 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SLC28A1O00337 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A1O00337 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A1O00337 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A1O00337 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A1O00337 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC28A1O00337 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
SLC28A1O00337 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A1O00337 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A1O00337 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SLC28A1O00337 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.35■□□□□ 0.69
SLC28A1O00337 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A1O00337 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SLC28A1O00337 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A1O00337 AL691432.2-201ENST00000607222 2038 ntBASIC19.35■□□□□ 0.69
SLC28A1O00337 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A1O00337 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A1O00337 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A1O00337 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A1O00337 AC007952.6-201ENST00000573168 2673 ntBASIC19.35■□□□□ 0.69
SLC28A1O00337 AC003957.1-201ENST00000625108 2673 ntBASIC19.35■□□□□ 0.69
SLC28A1O00337 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A1O00337 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A1O00337 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A1O00337 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
SLC28A1O00337 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A1O00337 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A1O00337 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC28A1O00337 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SLC28A1O00337 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC28A1O00337 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SLC28A1O00337 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A1O00337 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A1O00337 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC28A1O00337 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A1O00337 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A1O00337 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC28A1O00337 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A1O00337 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A1O00337 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A1O00337 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC28A1O00337 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A1O00337 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A1O00337 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC28A1O00337 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.34■□□□□ 0.69
SLC28A1O00337 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC28A1O00337 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC28A1O00337 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC28A1O00337 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC28A1O00337 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
SLC28A1O00337 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.34■□□□□ 0.69
SLC28A1O00337 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC28A1O00337 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A1O00337 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A1O00337 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A1O00337 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A1O00337 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC28A1O00337 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.34■□□□□ 0.69
SLC28A1O00337 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
SLC28A1O00337 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC28A1O00337 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC28A1O00337 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SLC28A1O00337 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC28A1O00337 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SLC28A1O00337 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
SLC28A1O00337 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.33■□□□□ 0.69
SLC28A1O00337 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.33■□□□□ 0.69
SLC28A1O00337 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms