Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRRM3A6NNA2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRRM3A6NNA2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.8■□□□□ 0.92
SRRM3A6NNA2 AF201337.1-201ENST00000520239 748 ntBASIC20.8■□□□□ 0.92
SRRM3A6NNA2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.8■□□□□ 0.92
SRRM3A6NNA2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.8■□□□□ 0.92
SRRM3A6NNA2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.8■□□□□ 0.92
SRRM3A6NNA2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.8■□□□□ 0.92
SRRM3A6NNA2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SRRM3A6NNA2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SRRM3A6NNA2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.8■□□□□ 0.92
SRRM3A6NNA2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRRM3A6NNA2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRRM3A6NNA2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRRM3A6NNA2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRRM3A6NNA2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRRM3A6NNA2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRRM3A6NNA2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRRM3A6NNA2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRRM3A6NNA2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRRM3A6NNA2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
SRRM3A6NNA2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SRRM3A6NNA2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRRM3A6NNA2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRRM3A6NNA2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRRM3A6NNA2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRRM3A6NNA2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRRM3A6NNA2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRRM3A6NNA2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRRM3A6NNA2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.79■□□□□ 0.92
SRRM3A6NNA2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRRM3A6NNA2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.79■□□□□ 0.92
SRRM3A6NNA2 SLC7A5P1-201ENST00000568957 537 ntBASIC20.79■□□□□ 0.92
SRRM3A6NNA2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SRRM3A6NNA2 AP004607.7-201ENST00000527152 1677 ntBASIC20.79■□□□□ 0.92
SRRM3A6NNA2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.79■□□□□ 0.92
SRRM3A6NNA2 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRRM3A6NNA2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SRRM3A6NNA2 BX005040.4-201ENST00000637145 1518 ntBASIC20.78■□□□□ 0.92
SRRM3A6NNA2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 AL158047.1-201ENST00000445918 881 ntBASIC20.78■□□□□ 0.92
SRRM3A6NNA2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRRM3A6NNA2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.77■□□□□ 0.92
SRRM3A6NNA2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRRM3A6NNA2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.77■□□□□ 0.92
SRRM3A6NNA2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.77■□□□□ 0.92
SRRM3A6NNA2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRRM3A6NNA2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRRM3A6NNA2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRRM3A6NNA2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRRM3A6NNA2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRRM3A6NNA2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRRM3A6NNA2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRRM3A6NNA2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.77■□□□□ 0.92
SRRM3A6NNA2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.77■□□□□ 0.92
SRRM3A6NNA2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRRM3A6NNA2 AL034346.1-201ENST00000568244 1277 ntBASIC20.77■□□□□ 0.92
SRRM3A6NNA2 AC010331.1-201ENST00000611423 582 ntBASIC20.77■□□□□ 0.92
SRRM3A6NNA2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.77■□□□□ 0.92
SRRM3A6NNA2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRRM3A6NNA2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRRM3A6NNA2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRRM3A6NNA2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SRRM3A6NNA2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SRRM3A6NNA2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SRRM3A6NNA2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRRM3A6NNA2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRRM3A6NNA2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRRM3A6NNA2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
SRRM3A6NNA2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SRRM3A6NNA2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRRM3A6NNA2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SRRM3A6NNA2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRRM3A6NNA2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SRRM3A6NNA2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.76■□□□□ 0.91
SRRM3A6NNA2 AC105036.2-201ENST00000569468 176 ntBASIC20.76■□□□□ 0.91
SRRM3A6NNA2 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SRRM3A6NNA2 AC125437.2-201ENST00000625180 2167 ntBASIC20.76■□□□□ 0.91
SRRM3A6NNA2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms