Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SNX18Q96RF0 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SNX18Q96RF0 LHFPL3-AS2-202ENST00000631061 1832 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SNX18Q96RF0 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 LINC01482-201ENST00000585484 2616 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SNX18Q96RF0 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SNX18Q96RF0 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SNX18Q96RF0 PCDH18-205ENST00000511115 1331 ntTSL 2 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 OR8G3P-203ENST00000641848 1344 ntBASIC7.19□□□□□ -1.26
SNX18Q96RF0 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SNX18Q96RF0 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC7.19□□□□□ -1.26
SNX18Q96RF0 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
SNX18Q96RF0 VN2R1P-201ENST00000449668 1743 ntBASIC7.18□□□□□ -1.26
SNX18Q96RF0 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 ERVFRD-1-202ENST00000542862 3184 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SNX18Q96RF0 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SNX18Q96RF0 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SNX18Q96RF0 AC018682.1-201ENST00000506009 1519 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SNX18Q96RF0 AL445250.1-203ENST00000641829 1535 ntBASIC7.18□□□□□ -1.26
SNX18Q96RF0 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 LRRC37A9P-201ENST00000603850 5376 ntBASIC7.18□□□□□ -1.26
SNX18Q96RF0 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SNX18Q96RF0 GLRX-201ENST00000237858 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SNX18Q96RF0 SMCO2-201ENST00000298876 1122 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 OR2G2-201ENST00000320065 954 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 TAC1-203ENST00000350485 975 ntTSL 5 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 Y_RNA.209-201ENST00000364156 111 ntBASIC7.18□□□□□ -1.26
SNX18Q96RF0 DYNLT3-202ENST00000378581 920 ntTSL 2 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 TRAV17-201ENST00000390445 484 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 AL590143.1-201ENST00000405071 138 ntBASIC7.18□□□□□ -1.26
SNX18Q96RF0 MTND3P20-201ENST00000407663 186 ntBASIC7.18□□□□□ -1.26
SNX18Q96RF0 SMCO2-202ENST00000416383 1272 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 AL445193.2-201ENST00000419596 620 ntTSL 3 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 TRGV5P-201ENST00000419915 354 ntBASIC7.18□□□□□ -1.26
SNX18Q96RF0 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 RPS6P25-201ENST00000464444 748 ntBASIC7.18□□□□□ -1.26
SNX18Q96RF0 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 AC114400.1-201ENST00000487624 681 ntTSL 3 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 RPL17P37-201ENST00000490729 548 ntBASIC7.18□□□□□ -1.26
SNX18Q96RF0 RN7SL792P-201ENST00000496286 305 ntBASIC7.18□□□□□ -1.26
SNX18Q96RF0 PPM1K-204ENST00000508256 923 ntTSL 2 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 AC026774.2-201ENST00000513990 1098 ntBASIC7.18□□□□□ -1.26
SNX18Q96RF0 IGHVII-22-1-201ENST00000517888 265 ntBASIC7.18□□□□□ -1.26
SNX18Q96RF0 AC090193.2-201ENST00000518970 537 ntTSL 4 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 AC108471.2-205ENST00000529314 628 ntTSL 3 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 AC025252.2-201ENST00000537470 502 ntBASIC7.18□□□□□ -1.26
SNX18Q96RF0 TUBD1-206ENST00000539018 1027 ntTSL 2 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 AC023905.1-203ENST00000560180 765 ntTSL 5 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 AC116348.2-201ENST00000563751 577 ntTSL 4 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 AC087565.1-201ENST00000565061 391 ntTSL 5 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 TBC1D29-201ENST00000579181 652 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SNX18Q96RF0 MIR4314-201ENST00000583321 92 ntBASIC7.18□□□□□ -1.26
SNX18Q96RF0 AC138761.2-201ENST00000583878 343 ntBASIC7.18□□□□□ -1.26
SNX18Q96RF0 TBC1D29-204ENST00000584297 602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SNX18Q96RF0 ZNF257-207ENST00000600162 817 ntTSL 3 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 OR7A1P-201ENST00000601206 970 ntBASIC7.18□□□□□ -1.26
SNX18Q96RF0 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 ACACA-232ENST00000614438 569 ntTSL 2 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 AF117829.2-201ENST00000619538 361 ntBASIC7.18□□□□□ -1.26
SNX18Q96RF0 AC243654.1-201ENST00000620218 293 ntTSL 2 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 AC002094.5-201ENST00000623773 629 ntBASIC7.18□□□□□ -1.26
SNX18Q96RF0 AP003072.5-201ENST00000623872 773 ntBASIC7.18□□□□□ -1.26
SNX18Q96RF0 MAGOHB-211ENST00000625272 319 ntTSL 3 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 LINC01620-205ENST00000637248 546 ntTSL 4 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 LRRC2-AS1-201ENST00000599511 2291 ntBASIC7.18□□□□□ -1.26
SNX18Q96RF0 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SNX18Q96RF0 ASIC5-201ENST00000537611 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SNX18Q96RF0 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SNX18Q96RF0 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SNX18Q96RF0 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
SNX18Q96RF0 GSTM2-204ENST00000369831 1730 ntTSL 2 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 GTF2H1-210ENST00000530496 1700 ntTSL 2 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SNX18Q96RF0 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SNX18Q96RF0 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 CAMK2D-213ENST00000514328 1497 ntTSL 5 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 AC068860.1-201ENST00000623701 3736 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC7.17□□□□□ -1.26
SNX18Q96RF0 OR5AQ1P-202ENST00000641257 1534 ntBASIC7.17□□□□□ -1.26
SNX18Q96RF0 OR5AQ1P-203ENST00000641818 1529 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms