Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC8.79□□□□□ -1
POLR2AP24928 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC8.79□□□□□ -1
POLR2AP24928 C3P1-202ENST00000497718 4954 ntBASIC8.79□□□□□ -1
POLR2AP24928 NFASC-206ENST00000404076 5728 ntTSL 5 BASIC8.79□□□□□ -1
POLR2AP24928 AL365217.1-201ENST00000398578 2436 ntBASIC8.79□□□□□ -1
POLR2AP24928 BCL6-202ENST00000406870 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
POLR2AP24928 LCORL-207ENST00000635767 10430 ntTSL 5 BASIC8.79□□□□□ -1
POLR2AP24928 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC8.79□□□□□ -1
POLR2AP24928 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC8.79□□□□□ -1
POLR2AP24928 GTF3C1-202ENST00000561623 7015 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
POLR2AP24928 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
POLR2AP24928 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC8.79□□□□□ -1
POLR2AP24928 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
POLR2AP24928 ERVV-2-201ENST00000601417 2431 ntAPPRIS P1 TSL 4 BASIC8.79□□□□□ -1
POLR2AP24928 WDR44-203ENST00000371825 4029 ntTSL 1 (best) BASIC8.79□□□□□ -1
POLR2AP24928 MALAT1-201ENST00000508832 1519 ntTSL 2 BASIC8.79□□□□□ -1
POLR2AP24928 ZNF3-207ENST00000424697 2718 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
POLR2AP24928 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
POLR2AP24928 HMMR-201ENST00000353866 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
POLR2AP24928 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
POLR2AP24928 IL22-201ENST00000328087 1150 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
POLR2AP24928 RNA5SP85-201ENST00000365378 119 ntBASIC8.79□□□□□ -1
POLR2AP24928 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC8.79□□□□□ -1
POLR2AP24928 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC8.79□□□□□ -1
POLR2AP24928 RAB5CP1-201ENST00000395972 580 ntBASIC8.79□□□□□ -1
POLR2AP24928 RN7SKP188-201ENST00000410789 317 ntBASIC8.79□□□□□ -1
POLR2AP24928 AL359076.1-201ENST00000426860 420 ntTSL 3 BASIC8.79□□□□□ -1
POLR2AP24928 AC009237.4-201ENST00000441078 238 ntBASIC8.79□□□□□ -1
POLR2AP24928 AL356121.1-201ENST00000442911 156 ntBASIC8.79□□□□□ -1
POLR2AP24928 RPL5P10-201ENST00000445207 894 ntBASIC8.79□□□□□ -1
POLR2AP24928 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC8.79□□□□□ -1
POLR2AP24928 AC005550.2-201ENST00000476382 318 ntBASIC8.79□□□□□ -1
POLR2AP24928 OR7E163P-201ENST00000505943 894 ntBASIC8.79□□□□□ -1
POLR2AP24928 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC8.79□□□□□ -1
POLR2AP24928 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC8.79□□□□□ -1
POLR2AP24928 AC023310.2-201ENST00000553844 547 ntBASIC8.79□□□□□ -1
POLR2AP24928 ARL6IP1-204ENST00000562819 578 ntTSL 5 BASIC8.79□□□□□ -1
POLR2AP24928 AL023284.3-202ENST00000571188 543 ntTSL 5 BASIC8.79□□□□□ -1
POLR2AP24928 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC8.79□□□□□ -1
POLR2AP24928 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
POLR2AP24928 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
POLR2AP24928 MAN1A2-201ENST00000356554 8576 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
POLR2AP24928 RPRD2-202ENST00000369068 4612 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
POLR2AP24928 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
POLR2AP24928 PAPPA2-201ENST00000367661 4369 ntTSL 1 (best) BASIC8.78□□□□□ -1
POLR2AP24928 ZNF711-203ENST00000373165 4124 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
POLR2AP24928 ARID1B-210ENST00000635849 5830 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
POLR2AP24928 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
POLR2AP24928 CCDC77-203ENST00000422000 2338 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
POLR2AP24928 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
POLR2AP24928 STARD4-212ENST00000512160 3500 ntTSL 2 BASIC8.78□□□□□ -1
POLR2AP24928 BRPF1-206ENST00000457855 4308 ntAPPRIS P3 TSL 2 BASIC8.78□□□□□ -1
POLR2AP24928 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
POLR2AP24928 MAST4-204ENST00000405643 7713 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
POLR2AP24928 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
POLR2AP24928 RN7SKP171-201ENST00000364417 303 ntBASIC8.78□□□□□ -1
POLR2AP24928 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC8.78□□□□□ -1
POLR2AP24928 AC015820.1-201ENST00000473882 321 ntBASIC8.78□□□□□ -1
POLR2AP24928 GUCY2GP-201ENST00000479705 3222 ntBASIC8.78□□□□□ -1
POLR2AP24928 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC8.78□□□□□ -1
POLR2AP24928 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC8.78□□□□□ -1
POLR2AP24928 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC8.78□□□□□ -1
POLR2AP24928 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC8.78□□□□□ -1
POLR2AP24928 IGHVII-51-2-201ENST00000519778 259 ntBASIC8.78□□□□□ -1
POLR2AP24928 OR5F2P-201ENST00000532761 941 ntBASIC8.78□□□□□ -1
POLR2AP24928 TRIM53BP-201ENST00000532912 1720 ntBASIC8.78□□□□□ -1
POLR2AP24928 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC8.78□□□□□ -1
POLR2AP24928 MYL6-211ENST00000548580 528 ntTSL 2 BASIC8.78□□□□□ -1
POLR2AP24928 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC8.78□□□□□ -1
POLR2AP24928 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC8.78□□□□□ -1
POLR2AP24928 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC8.78□□□□□ -1
POLR2AP24928 CLUHP10-201ENST00000631979 980 ntBASIC8.78□□□□□ -1
POLR2AP24928 NLRP1-216ENST00000617618 4788 ntAPPRIS P4 TSL 5 BASIC8.78□□□□□ -1
POLR2AP24928 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
POLR2AP24928 STX16-206ENST00000371132 4552 ntTSL 1 (best) BASIC8.78□□□□□ -1
POLR2AP24928 ZNF155-209ENST00000611002 2732 ntAPPRIS P3 TSL 4 BASIC8.78□□□□□ -1
POLR2AP24928 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
POLR2AP24928 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC8.78□□□□□ -1
POLR2AP24928 AL049543.1-201ENST00000499525 2874 ntTSL 2 BASIC8.77□□□□□ -1
POLR2AP24928 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC8.77□□□□□ -1
POLR2AP24928 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC8.77□□□□□ -1
POLR2AP24928 AC024337.1-201ENST00000558860 1562 ntTSL 4 BASIC8.77□□□□□ -1
POLR2AP24928 CCDC30-202ENST00000342022 3098 ntAPPRIS P2 TSL 5 BASIC8.77□□□□□ -1
POLR2AP24928 IRF1-201ENST00000245414 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
POLR2AP24928 C2CD3-201ENST00000313663 6283 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
POLR2AP24928 IL12B-201ENST00000231228 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
POLR2AP24928 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
POLR2AP24928 RNU12-2P-201ENST00000364789 156 ntBASIC8.77□□□□□ -1
POLR2AP24928 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC8.77□□□□□ -1
POLR2AP24928 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC8.77□□□□□ -1
POLR2AP24928 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC8.77□□□□□ -1
POLR2AP24928 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC8.77□□□□□ -1
POLR2AP24928 SNORA2C-201ENST00000408564 137 ntBASIC8.77□□□□□ -1
POLR2AP24928 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC8.77□□□□□ -1
POLR2AP24928 SRP68P2-201ENST00000456184 254 ntBASIC8.77□□□□□ -1
POLR2AP24928 VN1R6P-201ENST00000458417 907 ntBASIC8.77□□□□□ -1
POLR2AP24928 TUBD1-206ENST00000539018 1027 ntTSL 2 BASIC8.77□□□□□ -1
POLR2AP24928 AL132640.1-201ENST00000559594 619 ntBASIC8.77□□□□□ -1
POLR2AP24928 TRPM7-207ENST00000560955 7218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.77□□□□□ -1
POLR2AP24928 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC8.77□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms