Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ZNF19-210ENST00000567225 2838 ntTSL 3 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 IL15-207ENST00000514653 1388 ntTSL 5 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 CFAP61-205ENST00000377306 2017 ntTSL 5 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 AC018880.1-201ENST00000418898 1319 ntBASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 BIN2P2-201ENST00000503900 1303 ntBASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 HBS1L-202ENST00000367820 638 ntTSL 3 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 RNA5SP23-201ENST00000391006 105 ntBASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 RN7SKP261-201ENST00000410948 278 ntBASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 RFESDP1-201ENST00000422350 461 ntBASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 AL512882.1-201ENST00000436086 832 ntBASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 RPSAP49-201ENST00000445182 886 ntBASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 MTND2P25-201ENST00000449028 610 ntBASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 AL357037.1-201ENST00000454758 322 ntBASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 RN7SL19P-201ENST00000462522 306 ntBASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 C1orf112-208ENST00000496973 782 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 RN7SL388P-201ENST00000498736 339 ntBASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 IGLVIV-59-201ENST00000520218 250 ntBASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 AP003168.1-201ENST00000530091 307 ntBASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 AL133304.1-201ENST00000548199 549 ntTSL 4 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 AL162574.2-201ENST00000614618 657 ntBASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 SLC20A1P2-201ENST00000618036 966 ntBASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 AC004777.1-201ENST00000624317 287 ntBASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 ZBTB20-AS5-203ENST00000628886 819 ntTSL 5 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 AC006927.4-201ENST00000639187 543 ntBASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 AC006058.1-201ENST00000568686 5067 ntBASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 TTC23-202ENST00000394129 2505 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 NCAPH-202ENST00000427946 2363 ntTSL 2 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 GJB7-203ENST00000525899 2281 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
CDK5RAP1Q96SZ6 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 RN7SKP23-201ENST00000625159 4301 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 KLRB1-201ENST00000229402 1448 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 EEF1A1P3-201ENST00000417549 1385 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 GPM6B-210ENST00000493677 1372 ntTSL 2 BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 XRCC6P2-201ENST00000457831 1822 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 SCGB2A2-201ENST00000227918 505 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 TMCO5A-201ENST00000319669 1274 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 RNA5SP483-201ENST00000363431 118 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 ST3GAL3-213ENST00000372365 673 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 SNORA10B-201ENST00000384458 133 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 RNA5SP18-201ENST00000390935 121 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 RPL12P27-201ENST00000414870 496 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 AC109638.1-201ENST00000417406 326 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 PPP2R2DP1-201ENST00000420526 637 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 GAPDHP46-201ENST00000424043 994 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 HBBP1-201ENST00000433329 439 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 MTND1P26-201ENST00000440488 538 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 AL161454.1-201ENST00000446226 569 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 AC007000.1-201ENST00000453064 794 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 RN7SL55P-201ENST00000464534 297 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 AC007547.2-201ENST00000468802 360 ntBASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 LEF1-AS1-206ENST00000512129 430 ntTSL 3 BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
CDK5RAP1Q96SZ6 AC104938.1-203ENST00000561834 546 ntTSL 3 BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms