Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
NID1P14543 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC8.12□□□□□ -1.11
NID1P14543 AL645949.1-202ENST00000600073 242 ntBASIC8.12□□□□□ -1.11
NID1P14543 AC021749.1-201ENST00000604322 607 ntBASIC8.12□□□□□ -1.11
NID1P14543 AL627309.1-205ENST00000610542 723 ntTSL 5 BASIC8.12□□□□□ -1.11
NID1P14543 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC8.12□□□□□ -1.11
NID1P14543 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC8.12□□□□□ -1.11
NID1P14543 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC8.12□□□□□ -1.11
NID1P14543 TMEM182-211ENST00000640575 1155 ntTSL 5 BASIC8.12□□□□□ -1.11
NID1P14543 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NID1P14543 GPR182-201ENST00000300098 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NID1P14543 PSG11-202ENST00000320078 1575 ntAPPRIS P2 TSL 2 BASIC8.12□□□□□ -1.11
NID1P14543 CHEK2-206ENST00000402731 1545 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NID1P14543 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
NID1P14543 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NID1P14543 LRRC66-201ENST00000343457 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NID1P14543 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
NID1P14543 RCAN1-205ENST00000443408 2315 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NID1P14543 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
NID1P14543 SPX-201ENST00000256969 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NID1P14543 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NID1P14543 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NID1P14543 GFM2-207ENST00000509430 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NID1P14543 AC119674.1-213ENST00000641177 1386 ntBASIC8.11□□□□□ -1.11
NID1P14543 LINC01572-201ENST00000561611 2194 ntTSL 3 BASIC8.11□□□□□ -1.11
NID1P14543 FBXL17-206ENST00000619412 4059 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NID1P14543 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NID1P14543 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NID1P14543 LINC01140-201ENST00000461990 3181 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NID1P14543 CENPK-208ENST00000508421 1586 ntTSL 3 BASIC8.11□□□□□ -1.11
NID1P14543 EIF3EP2-201ENST00000423042 1814 ntBASIC8.11□□□□□ -1.11
NID1P14543 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NID1P14543 RBM7-204ENST00000541475 6725 ntTSL 2 BASIC8.11□□□□□ -1.11
NID1P14543 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NID1P14543 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NID1P14543 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC8.11□□□□□ -1.11
NID1P14543 SNORD83A-201ENST00000386747 95 ntBASIC8.11□□□□□ -1.11
NID1P14543 RNU6-1242P-201ENST00000391052 103 ntBASIC8.11□□□□□ -1.11
NID1P14543 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NID1P14543 VDAC1P8-201ENST00000406025 853 ntBASIC8.11□□□□□ -1.11
NID1P14543 RNU4-27P-201ENST00000410889 139 ntBASIC8.11□□□□□ -1.11
NID1P14543 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC8.11□□□□□ -1.11
NID1P14543 AL449283.1-202ENST00000418249 604 ntBASIC8.11□□□□□ -1.11
NID1P14543 AL441943.3-201ENST00000418524 587 ntTSL 5 BASIC8.11□□□□□ -1.11
NID1P14543 AL355863.1-201ENST00000424331 293 ntBASIC8.11□□□□□ -1.11
NID1P14543 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC8.11□□□□□ -1.11
NID1P14543 TTC4P1-201ENST00000427137 1158 ntBASIC8.11□□□□□ -1.11
NID1P14543 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
NID1P14543 AC245047.5-201ENST00000437312 556 ntBASIC8.11□□□□□ -1.11
NID1P14543 SNX18P2-201ENST00000438540 808 ntBASIC8.11□□□□□ -1.11
NID1P14543 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC8.11□□□□□ -1.11
NID1P14543 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC8.11□□□□□ -1.11
NID1P14543 AL357520.1-201ENST00000441557 453 ntBASIC8.11□□□□□ -1.11
NID1P14543 CRIP1P4-201ENST00000442565 229 ntBASIC8.11□□□□□ -1.11
NID1P14543 MTND5P2-201ENST00000442927 1142 ntBASIC8.11□□□□□ -1.11
NID1P14543 AC044797.1-201ENST00000445744 679 ntBASIC8.11□□□□□ -1.11
NID1P14543 TUBB8P1-201ENST00000447235 727 ntBASIC8.11□□□□□ -1.11
NID1P14543 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NID1P14543 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC8.11□□□□□ -1.11
NID1P14543 SETP6-201ENST00000479329 568 ntBASIC8.11□□□□□ -1.11
NID1P14543 NPM1P29-201ENST00000483112 803 ntBASIC8.11□□□□□ -1.11
NID1P14543 HNRNPA1P20-201ENST00000484852 955 ntBASIC8.11□□□□□ -1.11
NID1P14543 HGNC:18790-205ENST00000504171 980 ntTSL 2 BASIC8.11□□□□□ -1.11
NID1P14543 CASC16-201ENST00000510238 955 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NID1P14543 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC8.11□□□□□ -1.11
NID1P14543 HMGN1P17-201ENST00000513734 295 ntBASIC8.11□□□□□ -1.11
NID1P14543 AC098827.1-201ENST00000514630 667 ntBASIC8.11□□□□□ -1.11
NID1P14543 RNU2-30P-201ENST00000516209 141 ntBASIC8.11□□□□□ -1.11
NID1P14543 AC023403.1-202ENST00000521139 759 ntTSL 3 BASIC8.11□□□□□ -1.11
NID1P14543 MRPS28-207ENST00000521434 585 ntTSL 5 BASIC8.11□□□□□ -1.11
NID1P14543 SLA-223ENST00000524345 1003 ntTSL 2 BASIC8.11□□□□□ -1.11
NID1P14543 OR56A7P-201ENST00000524865 941 ntBASIC8.11□□□□□ -1.11
NID1P14543 OR5G1P-201ENST00000525221 946 ntBASIC8.11□□□□□ -1.11
NID1P14543 OR1D4-201ENST00000525719 939 ntBASIC8.11□□□□□ -1.11
NID1P14543 AL020996.2-202ENST00000527604 334 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
NID1P14543 AC022239.1-201ENST00000527922 435 ntTSL 5 BASIC8.11□□□□□ -1.11
NID1P14543 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC8.11□□□□□ -1.11
NID1P14543 OR4A42P-201ENST00000531397 938 ntBASIC8.11□□□□□ -1.11
NID1P14543 PRR13P2-201ENST00000533804 406 ntBASIC8.11□□□□□ -1.11
NID1P14543 WASF2-201ENST00000536657 1083 ntTSL 2 BASIC8.11□□□□□ -1.11
NID1P14543 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC8.11□□□□□ -1.11
NID1P14543 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC8.11□□□□□ -1.11
NID1P14543 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
NID1P14543 MTCO1P2-201ENST00000554243 703 ntBASIC8.11□□□□□ -1.11
NID1P14543 AC024270.3-201ENST00000565513 396 ntTSL 3 BASIC8.11□□□□□ -1.11
NID1P14543 OR1D5-201ENST00000575751 939 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
NID1P14543 RN7SL468P-201ENST00000582256 294 ntBASIC8.11□□□□□ -1.11
NID1P14543 AC026458.2-201ENST00000589323 531 ntTSL 5 BASIC8.11□□□□□ -1.11
NID1P14543 TBX18-AS1-208ENST00000591225 762 ntTSL 5 BASIC8.11□□□□□ -1.11
NID1P14543 AL031985.2-201ENST00000600955 480 ntBASIC8.11□□□□□ -1.11
NID1P14543 ZNF415-223ENST00000601215 561 ntTSL 4 BASIC8.11□□□□□ -1.11
NID1P14543 Z82195.1-201ENST00000604558 398 ntBASIC8.11□□□□□ -1.11
NID1P14543 DPRXP5-201ENST00000604662 539 ntBASIC8.11□□□□□ -1.11
NID1P14543 AL109618.2-201ENST00000605527 211 ntBASIC8.11□□□□□ -1.11
NID1P14543 AC073657.1-201ENST00000607504 316 ntTSL 3 BASIC8.11□□□□□ -1.11
NID1P14543 Metazoa_SRP.44-201ENST00000615037 294 ntBASIC8.11□□□□□ -1.11
NID1P14543 BSNDP3-201ENST00000617487 364 ntBASIC8.11□□□□□ -1.11
NID1P14543 AC007742.2-201ENST00000618226 398 ntBASIC8.11□□□□□ -1.11
NID1P14543 FOLR2-210ENST00000619261 1126 ntTSL 5 BASIC8.11□□□□□ -1.11
NID1P14543 AL109804.1-201ENST00000620777 562 ntTSL 5 BASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms